List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 99505

TPR repeat
This group has 5 members: 5 [B]acteria
Fingerprint: DYLFGDP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Synechococcus sp. (strain WH7803)SYNPW00125  UniProtKB/TrEMBL A5GHY6  Glycosyltransferase of family GT41
[B] Bradyrhizobium sp. (strain ORS278)BRASO01277  UniProtKB/TrEMBL A4YMX9  Putative O-linked N-acetylglucosamine transferase, SPINDLY family; TPR domain protein
[B] Rhodopseudomonas palustris (strain BisA53)RHOP501501  UniProtKB/TrEMBL Q07RG0  TPR repeat-containing protein PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein SMART: Tetratricopeptide domain protein KEGG: rpb:RPB_3801 TPR repeat protein
[B] Polynucleobacter sp. (strain QLW-P1DMWA-1)POLSQ01815  UniProtKB/TrEMBL A4SZX6  TPR repeat-containing protein
[B] Verminephrobacter eiseniae (strain EF01-2)VEREI04276  UniProtKB/TrEMBL A1WR45  TPR repeat protein