List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 382584

domain protein identified by match to protein family
This group has 5 members: 5 [B]acteria
Fingerprint: DRCAVRM

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Cyanothece sp. (strain PCC 7425 / ATCC 29141)CYAP401094  UniProtKB/TrEMBL B8HNH7  Protein of unkown function DUF1796 putative papain-like cysteine peptidase
[B] Gloeobacter violaceusGLOVI03328  UniProtKB/TrEMBL Q7NG29  unknown protein
[B] Synechococcus sp. (strain JA-2-3B'a(2-13))SYNJB01358  UniProtKB/TrEMBL Q2JLM7  GDSL-like lipase/acylhydrolase domain protein identified by match to protein family HMM PF00657; match to protein family HMM PF00686
[B] Synechococcus sp. (strain JA-3-3Ab)SYNJA02041  UniProtKB/TrEMBL Q2JSP6  starch binding domain protein identified by match to protein family HMM PF00686
[B] Nostoc punctiforme (strain ATCC 29133 / PCC 73102)NOSP704067  UniProtKB/TrEMBL B2IWU5  Glycoside hydrolase, starch-binding