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Keyword Protein Sequence Group Entry

OMA Group 229480

Ribose 5-phosphate isomerase
This group has 84 members: 8 [A]rchaea 76 [B]acteria
Fingerprint: NNMIIDC

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Sulfolobus acidocaldariusSULAC01205  UniProtKB/TrEMBL Q4J990  phosphoriboisomerase, D-ribose-5-phosphate ketol-isomerase ribose 5-phosphate isomerase
[A] Sulfolobus islandicus (strain L.S.2.15 / Lassen #1)SULIL01172  UniProtKB/TrEMBL C3MPM6  
[A] Sulfolobus islandicus (strain M.14.25 / Kamchatka #1)SULIM01098  UniProtKB/TrEMBL C3MYM0  
[A] Sulfolobus islandicus (strain M.16.27)SULIA01142  UniProtKB/TrEMBL C3N5A2  
[A] Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1)SULIY01181  UniProtKB/TrEMBL C3NDV6  
[A] Sulfolobus solfataricusSULSO00886  UniProtKB/TrEMBL C5SQS6  Ribose 5-phosphate isomerase
[A] Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta)THENV00170  UniProtKB/TrEMBL B1YAP9  Ribose 5-phosphate isomerase
[A] Pyrococcus furiosusPYRFU01246  UniProtKB/Swiss-Prot RPIA_PYRFU  Ribose-5-phosphate isomerase A
[B] Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083)BIFAA00359  UniProtKB/Swiss-Prot RPIA_BIFAA  ribose-5-phosphate isomerase A Catalyzes D-ribose 5-phosphate --> D-ribulose5-phosphate in the nonoxidative branch of the pentosephosphate pathway Orthologue of BL1623
[B] Bifidobacterium longumBIFLO01536  UniProtKB/Swiss-Prot RPIA_BIFLO  Ribose-5-phosphate isomerase A
[B] Bifidobacterium longum (strain DJO10A)BIFLD01728  UniProtKB/Swiss-Prot RPIA_BIFLD  Ribose 5-phosphate isomerase
[B] Chlamydia muridarumCHLMU00474  UniProtKB/Swiss-Prot RPIA_CHLMU  similar to GB:X08058, GB:X08094, GB:X08095, GB:X08096, GB:X15480, GB:X06547, GB:M24485, GB:D28456, GB:U30897, GB:U62589, SP:P09211, PID:1575434, PID:2076717, PID:2204207, PID:31946, PID:31948, PID:579940, PID:598158, PID:726098, and PID:763405; identified by sequence similarity; putative ribose 5-phosphate isomerase
[B] Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B)CHLTA00224  UniProtKB/Swiss-Prot RPIA_CHLTA  ribose 5-phosphate isomerase
[B] Chlamydia trachomatis (strain L2/434/Bu / ATCC VR902B)CHLT200460  UniProtKB/Swiss-Prot RPIA_CHLT2  Ribose 5-phosphate isomerase
[B] Chlamydia trachomatis (strain L2b/UCH-1/proctitis)CHLTB00460  UniProtKB/Swiss-Prot RPIA_CHLTB  Ribose 5-phosphate isomerase
[B] Acaryochloris marina (strain MBIC 11017)ACAM102259  UniProtKB/TrEMBL B0C376  Ribose 5-phosphate isomerase A
[B] Synechocystis sp. (strain PCC 6803)SYNY302414  UniProtKB/Swiss-Prot RPIA_SYNY3  Ribose-5-phosphate isomerase A
[B] Anabaena variabilis (strain ATCC 29413 / PCC 7937)ANAVT04405  UniProtKB/Swiss-Prot RPIA_ANAVT  Ribose 5-phosphate isomerase
[B] Anabaena sp. (strain PCC 7120)ANASP00877  UniProtKB/Swiss-Prot RPIA_ANASP  Ribose-5-phosphate isomerase A
[B] Nostoc punctiforme (strain ATCC 29133 / PCC 73102)NOSP701029  UniProtKB/TrEMBL B2IWA4  Ribose 5-phosphate isomerase
[B] Trichodesmium erythraeum (strain IMS101)TRIEI02142  UniProtKB/Swiss-Prot RPIA_TRIEI  Ribose 5-phosphate isomerase
[B] Prochlorococcus marinus (strain MIT 9301)PROM001680  UniProtKB/TrEMBL A3PEX8  Ribose 5-phosphate isomerase COG120 Ribose 5-phosphate isomerase [Carbohydrate transport and metabolism]
[B] Prochlorococcus marinus (strain MIT 9313)PROMM01504  UniProtKB/Swiss-Prot RPIA_PROMM  Ribose 5-phosphate isomerase
[B] Bacillus anthracisBACAN02562  UniProtKB/Swiss-Prot RPIA_BACAN  identified by match to TIGR protein family HMM TIGR00021 ribose 5-phosphate isomerase
[B] Bacillus cereus (strain AH187)BACC702651  UniProtKB/TrEMBL B7HTM4  Ribose 5-phosphate isomerase A
[B] Bacillus cereus (strain ATCC 10987)BACC102789  UniProtKB/Swiss-Prot RPIA_BACC1  identified by match to protein family HMM TIGR00021 ribose 5-phosphate isomerase
[B] Bacillus cereus (strain ATCC 14579 / DSM 31)BACCR02629  UniProtKB/Swiss-Prot RPIA_BACCR  Ribose 5-phosphate isomerase
[B] Bacillus cereus (strain G9842)BACC202663  UniProtKB/TrEMBL B7IJL4  Ribose 5-phosphate isomerase A
[B] Bacillus cereus (strain ZK)BACCZ02491  UniProtKB/Swiss-Prot RPIA_BACCZ  ribose 5-phosphate isomerase
[B] Bacillus thuringiensis (strain Al Hakam)BACAH02369  UniProtKB/TrEMBL A0RF02  ribose 5-phosphate isomerase
[B] Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)EXIS201152  UniProtKB/Swiss-Prot RPIA_EXIS2  Ribose 5-phosphate isomerase
[B] Lactobacillus acidophilusLACAC00560  UniProtKB/Swiss-Prot RPIA_LACAC  RpiA COG0120 Ribose 5-phosphate isomerase ribose-5-phosphate isomerase
[B] Lactobacillus plantarumLACPL00510  UniProtKB/Swiss-Prot RPIA_LACPL  ribose 5-phosphate epimerase
[B] Leuconostoc citreum (strain KM20)LEUCK00152  UniProtKB/TrEMBL B1MWT7  Ribose 5-phosphate isomerase A
[B] Oenococcus oeni (strain BAA-331 / PSU-1)OENOB01449  UniProtKB/TrEMBL Q04DK9  Ribose 5-phosphate isomerase
[B] Rhizobium melilotiRHIME01835  UniProtKB/Swiss-Prot RPIA_RHIME  Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE RIBOSE 5-PHOSPHATE ISOMERASE PROTEIN
[B] Bordetella pertussisBORPE02132  UniProtKB/Swiss-Prot RPIA_BORPE  Similar to Escherichia coli, and ribose 5-phosphate isomerase A RpiA or b2914 or z4252 or ecs3785 SW:RPIA_ECOLI (P27252) (219 aa) fasta scores: E(): 4.9e-45, 59.72% id in 221 aa ribose 5-phosphate isomerase a
[B] Burkholderia xenovorans (strain LB400)BURXL01827  UniProtKB/Swiss-Prot RPIA_BURXL  Ribose-5-phosphate isomerase
[B] Polynucleobacter sp. (strain QLW-P1DMWA-1)POLSQ01253  UniProtKB/Swiss-Prot RPIA_POLSQ  Ribose-5-phosphate isomerase
[B] Thiobacillus denitrificans (strain ATCC 25259)THIDA02363  UniProtKB/Swiss-Prot RPIA_THIDA  ribose 5-phosphate isomerase
[B] Methylobacillus flagellatus (strain KT / ATTC 51484 / DSM 6875)METFK00129  UniProtKB/TrEMBL Q1GXJ5  ribose 5-phosphate isomerase
[B] Laribacter hongkongensis (strain HLHK9)LARHH00857  UniProtKB/Swiss-Prot RPIA_LARHH  RpiA
[B] Nitrosomonas europaeaNITEU01694  UniProtKB/Swiss-Prot RPIA_NITEU  Ribose 5-phosphate isomerase
[B] Nitrosomonas eutropha (strain C71)NITEC01719  UniProtKB/TrEMBL Q0AF20  ribose 5-phosphate isomerase KEGG: neu:NE1743 ribose 5-phosphate isomerase TIGRFAM: ribose 5-phosphate isomerase PFAM: Ribose 5-phosphate isomerase
[B] Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849)NITMU00421  UniProtKB/Swiss-Prot RPIA_NITMU  ribose 5-phosphate isomerase
[B] Azoarcus sp. (strain EbN1)AZOSE00542  UniProtKB/Swiss-Prot RPIA_AZOSE  Ribose 5-phosphate isomerase A
[B] Idiomarina loihiensisIDILO02076  UniProtKB/Swiss-Prot RPIA_IDILO  Ribose 5-phosphate isomerase
[B] Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)SHEDO01070  UniProtKB/Swiss-Prot RPIA_SHEDO  Ribose 5-phosphate isomerase
[B] Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)NITOC02537  UniProtKB/Swiss-Prot RPIA_NITOC  Ribose 5-phosphate epimerase
[B] Thioalkalivibrio sp. (strain HL-EbGR7)THISH02734  UniProtKB/Swiss-Prot RPIA_THISH  Ribose 5-phosphate isomerase
[B] Buchnera aphidicola subsp. Cinara cedriBUCCC00239  UniProtKB/TrEMBL Q057H5  ribose 5-phosphate isomerase COG_category G;COG_number COG0120; RpiA
[B] Escherichia coli O6:K15:H31 (strain 536)ECOL502859  UniProtKB/Swiss-Prot RPIA_ECOL5  ribose 5-phosphate isomerase A
[B] Proteus mirabilis (strain HI4320)PROMH02010  UniProtKB/Swiss-Prot RPIA_PROMH  Ribose 5-phosphate isomerase A
[B] Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573)ALCBS02603  UniProtKB/Swiss-Prot RPIA_ALCBS  Ribose 5-phosphate isomerase
[B] Hahella chejuensis (strain KCTC 2396)HAHCH01009  UniProtKB/Swiss-Prot RPIA_HAHCH  ribose 5-phosphate isomerase A TIGRFAMsMatches:TIGR00021
[B] Haemophilus influenzae (strain PittGG)HAEIG00900  UniProtKB/Swiss-Prot RPIA_HAEIG  Ribose-5-phosphate isomerase A
[B] Haemophilus somnus (strain 129PT)HAES100123  UniProtKB/Swiss-Prot RPIA_HAES1  Ribose-5-phosphate isomerase
[B] Haemophilus somnus (strain 2336)HAES201958  UniProtKB/Swiss-Prot RPIA_HAES2  Ribose-5-phosphate isomerase A
[B] Mannheimia succiniciproducens (strain MBEL55E)MANSM01738  UniProtKB/Swiss-Prot RPIA_MANSM  Ribose 5-phosphate isomerase RpiA protein
[B] Psychrobacter arcticus (strain DSM 17307 / 273-4)PSYA200938  UniProtKB/TrEMBL Q4FT49  Ribose-5-phosphate isomerase
[B] Cellvibrio japonicus (strain Ueda107)CELJU00235  UniProtKB/TrEMBL B3PGI3  Ribose 5-phosphate isomerase A
[B] Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)PSEF505810  UniProtKB/Swiss-Prot RPIA_PSEF5  identified by similarity to SP:P27252; match to protein family HMM PF06026; match to protein family HMM TIGR00021 ribose 5-phosphate isomerase
[B] Pseudomonas fluorescens (strain PfO-1)PSEPF05367  UniProtKB/Swiss-Prot RPIA_PSEPF  Ribose 5-phosphate isomerase
[B] Pseudomonas syringae (pv. tomato)PSESM04997  UniProtKB/Swiss-Prot RPIA_PSESM  ribose 5-phosphate isomerase
[B] Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)PSE1404560  UniProtKB/Swiss-Prot RPIA_PSE14  identified by similarity to SP:P27252; match to protein family HMM PF06026; match to protein family HMM TIGR00021 ribose 5-phosphate isomerase A
[B] Pseudomonas syringae pv. syringae (strain B728a)PSEU204826  UniProtKB/Swiss-Prot RPIA_PSEU2  Ribose 5-phosphate isomerase
[B] Francisella philomiragia subsp. philomiragia (strain ATCC 25017)FRAP200096  UniProtKB/Swiss-Prot RPIA_FRAP2  Ribose-5-phosphate isomerase
[B] Francisella tularensis (subsp. tularensis)FRATT01170  UniProtKB/Swiss-Prot RPIA_FRATT  Similar to RPIA_SHEON (Q8EHR7) Ribose 5-phosphate isomerase A from Shewanella oneidensis (219 aa). FASTA: opt: 824 Z-score: 1033.1 E(): 1.2e-49 Smith-Waterman score: 824; 60.000 identity in 210 aa overlap. Ribose 5-phospate isomerase A
[B] Francisella tularensis subsp. holarctica (strain FTA)FRATF00595  UniProtKB/Swiss-Prot RPIA_FRATF  Ribose-5-phosphate isomerase A
[B] Francisella tularensis subsp. holarctica (strain LVS)FRATH00684  UniProtKB/Swiss-Prot RPIA_FRATH  Ribose 5-phospate isomerase A
[B] Francisella tularensis subsp. holarctica (strain OSU18)FRATO00589  UniProtKB/TrEMBL Q0BMK1  Ribose-5-phosphate isomerase
[B] Francisella tularensis subsp. mediasiatica (strain FSC147)FRATM00625  UniProtKB/Swiss-Prot RPIA_FRATM  Ribose 5-phosphate isomerase A
[B] Francisella tularensis subsp. novicida (strain U112)FRATN01160  UniProtKB/Swiss-Prot RPIA_FRATN  ribose 5-phospate isomerase A
[B] Francisella tularensis subsp. tularensis (strain WY96-3418)FRATW00977  UniProtKB/Swiss-Prot RPIA_FRATW  Ribose 5-phosphate isomerase A
[B] Mycobacteriophage FRAT1FRAT101168  UniProtKB/Swiss-Prot RPIA_FRAT1  Ribose 5-phospate isomerase A Similar to RPIA_SHEON (Q8EHR7) Ribose 5-phosphate isomerase A from Shewanella oneidensis (219 aa). FASTA: opt: 824 Z-score: 1033.1 E(): 1.2e-49 Smith-Waterman score: 824; 60.000 identity in 210 aa overlap.
[B] Vibrio vulnificusVIBVU01381   NP_760445.1  COG0120 Ribose 5-phosphate isomerase
[B] Vibrio vulnificus (strain YJ016)VIBVY02821  UniProtKB/Swiss-Prot RPIA_VIBVY  Ribose-5-phosphate isomerase A
[B] Stenotrophomonas maltophilia (strain K279a)STRMK03626  UniProtKB/Swiss-Prot RPIA_STRMK  Putative ribose 5-phosphate isomerase
[B] Stenotrophomonas maltophilia (strain R551-3)STRM503264  UniProtKB/Swiss-Prot RPIA_STRM5  Ribose 5-phosphate isomerase
[B] Xylella fastidiosaXYLFA01977   NP_299297.1  similar to SP|P27252 (percent identity: 57 %/query alignment coverage: 84.5 %/subject alignment coverage: 94.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -147 ribose-5-phosphate isomerase A
[B] Xylella fastidiosa (strain M12)XYLFM00840  UniProtKB/Swiss-Prot RPIA_XYLFM  Ribose-5-phosphate isomerase
[B] Xylella fastidiosa (strain M23)XYLF200801  UniProtKB/TrEMBL B2IAJ9  Ribose 5-phosphate isomerase
[B] Xylella fastidiosa (strain Temecula1 / ATCC 700964)XYLFT00748  UniProtKB/Swiss-Prot RPIA_XYLFT  Ribose-5-phosphate isomerase A
[B] Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA)VESOH00210  UniProtKB/Swiss-Prot RPIA_VESOH  Ribose 5-phosphate isomerase