| [A] Sulfolobus acidocaldarius | SULAC01205 | Q4J990 | phosphoriboisomerase, D-ribose-5-phosphate ketol-isomerase ribose 5-phosphate isomerase |
| [A] Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) | SULIL01172 | C3MPM6 | |
| [A] Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) | SULIM01098 | C3MYM0 | |
| [A] Sulfolobus islandicus (strain M.16.27) | SULIA01142 | C3N5A2 | |
| [A] Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) | SULIY01181 | C3NDV6 | |
| [A] Sulfolobus solfataricus | SULSO00886 | C5SQS6 | Ribose 5-phosphate isomerase |
| [A] Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) | THENV00170 | B1YAP9 | Ribose 5-phosphate isomerase |
| [A] Pyrococcus furiosus | PYRFU01246 | RPIA_PYRFU | Ribose-5-phosphate isomerase A |
| [B] Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) | BIFAA00359 | RPIA_BIFAA | ribose-5-phosphate isomerase A Catalyzes D-ribose 5-phosphate --> D-ribulose5-phosphate in the nonoxidative branch of the pentosephosphate pathway Orthologue of BL1623 |
| [B] Bifidobacterium longum | BIFLO01536 | RPIA_BIFLO | Ribose-5-phosphate isomerase A |
| [B] Bifidobacterium longum (strain DJO10A) | BIFLD01728 | RPIA_BIFLD | Ribose 5-phosphate isomerase |
| [B] Chlamydia muridarum | CHLMU00474 | RPIA_CHLMU | similar to GB:X08058, GB:X08094, GB:X08095, GB:X08096, GB:X15480, GB:X06547, GB:M24485, GB:D28456, GB:U30897, GB:U62589, SP:P09211, PID:1575434, PID:2076717, PID:2204207, PID:31946, PID:31948, PID:579940, PID:598158, PID:726098, and PID:763405; identified by sequence similarity; putative ribose 5-phosphate isomerase |
| [B] Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) | CHLTA00224 | RPIA_CHLTA | ribose 5-phosphate isomerase |
| [B] Chlamydia trachomatis (strain L2/434/Bu / ATCC VR902B) | CHLT200460 | RPIA_CHLT2 | Ribose 5-phosphate isomerase |
| [B] Chlamydia trachomatis (strain L2b/UCH-1/proctitis) | CHLTB00460 | RPIA_CHLTB | Ribose 5-phosphate isomerase |
| [B] Acaryochloris marina (strain MBIC 11017) | ACAM102259 | B0C376 | Ribose 5-phosphate isomerase A |
| [B] Synechocystis sp. (strain PCC 6803) | SYNY302414 | RPIA_SYNY3 | Ribose-5-phosphate isomerase A |
| [B] Anabaena variabilis (strain ATCC 29413 / PCC 7937) | ANAVT04405 | RPIA_ANAVT | Ribose 5-phosphate isomerase |
| [B] Anabaena sp. (strain PCC 7120) | ANASP00877 | RPIA_ANASP | Ribose-5-phosphate isomerase A |
| [B] Nostoc punctiforme (strain ATCC 29133 / PCC 73102) | NOSP701029 | B2IWA4 | Ribose 5-phosphate isomerase |
| [B] Trichodesmium erythraeum (strain IMS101) | TRIEI02142 | RPIA_TRIEI | Ribose 5-phosphate isomerase |
| [B] Prochlorococcus marinus (strain MIT 9301) | PROM001680 | A3PEX8 | Ribose 5-phosphate isomerase COG120 Ribose 5-phosphate isomerase [Carbohydrate transport and metabolism] |
| [B] Prochlorococcus marinus (strain MIT 9313) | PROMM01504 | RPIA_PROMM | Ribose 5-phosphate isomerase |
| [B] Bacillus anthracis | BACAN02562 | RPIA_BACAN | identified by match to TIGR protein family HMM TIGR00021 ribose 5-phosphate isomerase |
| [B] Bacillus cereus (strain AH187) | BACC702651 | B7HTM4 | Ribose 5-phosphate isomerase A |
| [B] Bacillus cereus (strain ATCC 10987) | BACC102789 | RPIA_BACC1 | identified by match to protein family HMM TIGR00021 ribose 5-phosphate isomerase |
| [B] Bacillus cereus (strain ATCC 14579 / DSM 31) | BACCR02629 | RPIA_BACCR | Ribose 5-phosphate isomerase |
| [B] Bacillus cereus (strain G9842) | BACC202663 | B7IJL4 | Ribose 5-phosphate isomerase A |
| [B] Bacillus cereus (strain ZK) | BACCZ02491 | RPIA_BACCZ | ribose 5-phosphate isomerase |
| [B] Bacillus thuringiensis (strain Al Hakam) | BACAH02369 | A0RF02 | ribose 5-phosphate isomerase |
| [B] Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) | EXIS201152 | RPIA_EXIS2 | Ribose 5-phosphate isomerase |
| [B] Lactobacillus acidophilus | LACAC00560 | RPIA_LACAC | RpiA COG0120 Ribose 5-phosphate isomerase ribose-5-phosphate isomerase |
| [B] Lactobacillus plantarum | LACPL00510 | RPIA_LACPL | ribose 5-phosphate epimerase |
| [B] Leuconostoc citreum (strain KM20) | LEUCK00152 | B1MWT7 | Ribose 5-phosphate isomerase A |
| [B] Oenococcus oeni (strain BAA-331 / PSU-1) | OENOB01449 | Q04DK9 | Ribose 5-phosphate isomerase |
| [B] Rhizobium meliloti | RHIME01835 | RPIA_RHIME | Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE RIBOSE 5-PHOSPHATE ISOMERASE PROTEIN |
| [B] Bordetella pertussis | BORPE02132 | RPIA_BORPE | Similar to Escherichia coli, and ribose 5-phosphate isomerase A RpiA or b2914 or z4252 or ecs3785 SW:RPIA_ECOLI (P27252) (219 aa) fasta scores: E(): 4.9e-45, 59.72% id in 221 aa ribose 5-phosphate isomerase a |
| [B] Burkholderia xenovorans (strain LB400) | BURXL01827 | RPIA_BURXL | Ribose-5-phosphate isomerase |
| [B] Polynucleobacter sp. (strain QLW-P1DMWA-1) | POLSQ01253 | RPIA_POLSQ | Ribose-5-phosphate isomerase |
| [B] Thiobacillus denitrificans (strain ATCC 25259) | THIDA02363 | RPIA_THIDA | ribose 5-phosphate isomerase |
| [B] Methylobacillus flagellatus (strain KT / ATTC 51484 / DSM 6875) | METFK00129 | Q1GXJ5 | ribose 5-phosphate isomerase |
| [B] Laribacter hongkongensis (strain HLHK9) | LARHH00857 | RPIA_LARHH | RpiA |
| [B] Nitrosomonas europaea | NITEU01694 | RPIA_NITEU | Ribose 5-phosphate isomerase |
| [B] Nitrosomonas eutropha (strain C71) | NITEC01719 | Q0AF20 | ribose 5-phosphate isomerase KEGG: neu:NE1743 ribose 5-phosphate isomerase TIGRFAM: ribose 5-phosphate isomerase PFAM: Ribose 5-phosphate isomerase |
| [B] Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) | NITMU00421 | RPIA_NITMU | ribose 5-phosphate isomerase |
| [B] Azoarcus sp. (strain EbN1) | AZOSE00542 | RPIA_AZOSE | Ribose 5-phosphate isomerase A |
| [B] Idiomarina loihiensis | IDILO02076 | RPIA_IDILO | Ribose 5-phosphate isomerase |
| [B] Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) | SHEDO01070 | RPIA_SHEDO | Ribose 5-phosphate isomerase |
| [B] Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) | NITOC02537 | RPIA_NITOC | Ribose 5-phosphate epimerase |
| [B] Thioalkalivibrio sp. (strain HL-EbGR7) | THISH02734 | RPIA_THISH | Ribose 5-phosphate isomerase |
| [B] Buchnera aphidicola subsp. Cinara cedri | BUCCC00239 | Q057H5 | ribose 5-phosphate isomerase COG_category G;COG_number COG0120; RpiA |
| [B] Escherichia coli O6:K15:H31 (strain 536) | ECOL502859 | RPIA_ECOL5 | ribose 5-phosphate isomerase A |
| [B] Proteus mirabilis (strain HI4320) | PROMH02010 | RPIA_PROMH | Ribose 5-phosphate isomerase A |
| [B] Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) | ALCBS02603 | RPIA_ALCBS | Ribose 5-phosphate isomerase |
| [B] Hahella chejuensis (strain KCTC 2396) | HAHCH01009 | RPIA_HAHCH | ribose 5-phosphate isomerase A TIGRFAMsMatches:TIGR00021 |
| [B] Haemophilus influenzae (strain PittGG) | HAEIG00900 | RPIA_HAEIG | Ribose-5-phosphate isomerase A |
| [B] Haemophilus somnus (strain 129PT) | HAES100123 | RPIA_HAES1 | Ribose-5-phosphate isomerase |
| [B] Haemophilus somnus (strain 2336) | HAES201958 | RPIA_HAES2 | Ribose-5-phosphate isomerase A |
| [B] Mannheimia succiniciproducens (strain MBEL55E) | MANSM01738 | RPIA_MANSM | Ribose 5-phosphate isomerase RpiA protein |
| [B] Psychrobacter arcticus (strain DSM 17307 / 273-4) | PSYA200938 | Q4FT49 | Ribose-5-phosphate isomerase |
| [B] Cellvibrio japonicus (strain Ueda107) | CELJU00235 | B3PGI3 | Ribose 5-phosphate isomerase A |
| [B] Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) | PSEF505810 | RPIA_PSEF5 | identified by similarity to SP:P27252; match to protein family HMM PF06026; match to protein family HMM TIGR00021 ribose 5-phosphate isomerase |
| [B] Pseudomonas fluorescens (strain PfO-1) | PSEPF05367 | RPIA_PSEPF | Ribose 5-phosphate isomerase |
| [B] Pseudomonas syringae (pv. tomato) | PSESM04997 | RPIA_PSESM | ribose 5-phosphate isomerase |
| [B] Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) | PSE1404560 | RPIA_PSE14 | identified by similarity to SP:P27252; match to protein family HMM PF06026; match to protein family HMM TIGR00021 ribose 5-phosphate isomerase A |
| [B] Pseudomonas syringae pv. syringae (strain B728a) | PSEU204826 | RPIA_PSEU2 | Ribose 5-phosphate isomerase |
| [B] Francisella philomiragia subsp. philomiragia (strain ATCC 25017) | FRAP200096 | RPIA_FRAP2 | Ribose-5-phosphate isomerase |
| [B] Francisella tularensis (subsp. tularensis) | FRATT01170 | RPIA_FRATT | Similar to RPIA_SHEON (Q8EHR7) Ribose 5-phosphate isomerase A from Shewanella oneidensis (219 aa). FASTA: opt: 824 Z-score: 1033.1 E(): 1.2e-49 Smith-Waterman score: 824; 60.000 identity in 210 aa overlap. Ribose 5-phospate isomerase A |
| [B] Francisella tularensis subsp. holarctica (strain FTA) | FRATF00595 | RPIA_FRATF | Ribose-5-phosphate isomerase A |
| [B] Francisella tularensis subsp. holarctica (strain LVS) | FRATH00684 | RPIA_FRATH | Ribose 5-phospate isomerase A |
| [B] Francisella tularensis subsp. holarctica (strain OSU18) | FRATO00589 | Q0BMK1 | Ribose-5-phosphate isomerase |
| [B] Francisella tularensis subsp. mediasiatica (strain FSC147) | FRATM00625 | RPIA_FRATM | Ribose 5-phosphate isomerase A |
| [B] Francisella tularensis subsp. novicida (strain U112) | FRATN01160 | RPIA_FRATN | ribose 5-phospate isomerase A |
| [B] Francisella tularensis subsp. tularensis (strain WY96-3418) | FRATW00977 | RPIA_FRATW | Ribose 5-phosphate isomerase A |
| [B] Mycobacteriophage FRAT1 | FRAT101168 | RPIA_FRAT1 | Ribose 5-phospate isomerase A Similar to RPIA_SHEON (Q8EHR7) Ribose 5-phosphate isomerase A from Shewanella oneidensis (219 aa). FASTA: opt: 824 Z-score: 1033.1 E(): 1.2e-49 Smith-Waterman score: 824; 60.000 identity in 210 aa overlap. |
| [B] Vibrio vulnificus | VIBVU01381 | NP_760445.1 | COG0120 Ribose 5-phosphate isomerase |
| [B] Vibrio vulnificus (strain YJ016) | VIBVY02821 | RPIA_VIBVY | Ribose-5-phosphate isomerase A |
| [B] Stenotrophomonas maltophilia (strain K279a) | STRMK03626 | RPIA_STRMK | Putative ribose 5-phosphate isomerase |
| [B] Stenotrophomonas maltophilia (strain R551-3) | STRM503264 | RPIA_STRM5 | Ribose 5-phosphate isomerase |
| [B] Xylella fastidiosa | XYLFA01977 | NP_299297.1 | similar to SP|P27252 (percent identity: 57 %/query alignment coverage: 84.5 %/subject alignment coverage: 94.5 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -147 ribose-5-phosphate isomerase A |
| [B] Xylella fastidiosa (strain M12) | XYLFM00840 | RPIA_XYLFM | Ribose-5-phosphate isomerase |
| [B] Xylella fastidiosa (strain M23) | XYLF200801 | B2IAJ9 | Ribose 5-phosphate isomerase |
| [B] Xylella fastidiosa (strain Temecula1 / ATCC 700964) | XYLFT00748 | RPIA_XYLFT | Ribose-5-phosphate isomerase A |
| [B] Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) | VESOH00210 | RPIA_VESOH | Ribose 5-phosphate isomerase |