List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 98878

DNA-3-methyladenine glycosylase
This group has 14 members: 2 [E]ukaryota 3 [A]rchaea 9 [B]acteria
Fingerprint: DIELREC

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Schizosaccharomyces pombeSCHPO03194  UniProtKB/Swiss-Prot MAG2_SCHPO  DNA-3-methyladenine glycosidase; AlkA family; involved in nucleotide-excision repair; involved in DNA repair; similar to S. pombe mag1 (paralog); no apparent S. cerevisiae ortholog
[E] Sorghum bicolorSORBI05409   4151409  jgi|Sorbi1|4151409|gw1.9.16580.1
[A] Haloarcula marismortuiHALMA00962  UniProtKB/TrEMBL Q5V352  DNA-3-methyladenine glycosylase
[A] Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)HALLT01705  UniProtKB/TrEMBL B9LPN6  HhH-GPD family protein
[A] Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)NATPD02035  UniProtKB/TrEMBL Q3INX6  DNA N-glycosylase / DNA lyase
[B] Solibacter usitatus (strain Ellin6076)SOLUE06154  UniProtKB/TrEMBL Q01SY7  DNA-3-methyladenine glycosylase II PFAM: HhH-GPD family protein KEGG: gvi:gll2018 probable DNA-3-methyladenine glycosylase
[B] Clostridium botulinum (strain Okra / Type B1)CLOBK00649  UniProtKB/TrEMBL B1IDQ2  Methylated-dna--protein-cysteine methyltransferase
[B] Roseobacter denitrificans (strain ATCC 33942 / OCh 114)ROSDO02938  UniProtKB/TrEMBL Q164B0  DNA-3-methyladenine glycosylase II, putative
[B] Silicibacter pomeroyiSILPO02078  UniProtKB/TrEMBL Q5LRK0  identified by match to protein family HMM PF00730 DNA-3-methyladenine glycosylase II, putative
[B] Pelagibacter ubiquePELUB00182  UniProtKB/TrEMBL Q4FP82  DNA-3-methyladenine glycosylase I
[B] Herminiimonas arsenicoxydansHERAR01214   CAL61460.1  Putative DNA-3-methyladenine glycosylase II
[B] Psychrobacter sp. (strain PRwf-1)PSYWF00486  UniProtKB/TrEMBL A5WCQ9  HhH-GPD family protein
[B] Leptospira interrogansLEPIN01359  UniProtKB/TrEMBL Q8F6D8  DNA-3-methyladenine glycosylase
[B] Leptospira interrogans (serogroup Icterohaemorrhagiae / serovar Copenhageni)LEPIC02283  UniProtKB/TrEMBL Q72PV5  identified by sequence similarity; putative; ORF located using Blastx/Glimmer 3-methyladenine DNA glycosylase