List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 12942
Polysaccharide deacetylase
This group has 11 members: 11 [B]acteria
Fingerprint: DGAIILL
| [B] Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) | MYCA900454 | B1MGM4 | Possible glycosyl hydrolase |
| [B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) | STRGG02094 | B1W0G1 | Putative deacetylase |
| [B] Anabaena variabilis (strain ATCC 29413 / PCC 7937) | ANAVT04706 | Q3M3P2 | Polysaccharide deacetylase |
| [B] Anabaena sp. (strain PCC 7120) | ANASP01775 | Q8YW23 | Alr1793 protein |
| [B] Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) | DICT600341 | B5YCH0 | Xylanase |
| [B] Dictyoglomus turgidum (strain Z-1310 / DSM 6724) | DICTD00410 | B8E1W8 | Polysaccharide deacetylase |
| [B] Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) | OLICO01723 | B6JF61 | Polysaccharide deacetylase |
| [B] Thermotoga maritima | THEMA00113 | Q9WXW8 | XylU-related protein |
| [B] Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) | THEP100800 | A5IKV7 | Polysaccharide deacetylase precursor |
| [B] Thermotoga sp. (strain RQ2) | THESQ00824 | B1LA38 | Polysaccharide deacetylase precursor |
| [B] Methylokorus infernorum (strain V4) | METI400334 | B3DYB7 | Polysaccharide deacetylase family protein |