List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 224297
beta-galactosidase
This group has 6 members: 6 [B]acteria
Fingerprint: DEYGLYL
| [B] Streptomyces coelicolor | STRCO06413 | Q9ZBF6 | SC9B5.24, lacZ*, beta-galactosidase, len: 1307 aa; similar to many e.g. TR:O85167 (EMBL:AF047824) beta-galactosidase from Bacillus megaterium (1034 aa) fasta scores: opt: 1750, z-score: 2221.6, E(): 0, (37.4% identity in 1256 aa overlap). Note that this CDS is approx. 300 residues longer than the homologues due to an extra region around residues 600 to 900. Contains PS00719 Glycosyl hydrolases family 2 signature 1 and PS00608 Glycosyl hydrolases family 2 acid /base catalyst. Also contains Pfam match to entry PF00703 glycosyl_hydro7, Glycosyl hydrolases family 2. putative beta-galactosidase |
| [B] Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) | BIFAA01578 | A1A3T0 | beta-galactosidase Orthologue of BH2723 |
| [B] Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) | BREBN05746 | C0Z9T1 | Probable beta-galactosidase |
| [B] Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) | CALS800319 | A4XGG8 | Glycoside hydrolase family 2, TIM barrel |
| [B] Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) | LACDA01106 | BGAL_LACDA | Beta-galactosidase |
| [B] Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) | LACDB00919 | Q04A66 | Beta-galactosidase |