List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 278885

Protein of unknown function
This group has 5 members: 5 [E]ukaryota
Fingerprint: CLSHITE

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Oryza sativaORYSA08657  UniProtKB/TrEMBL Q94LB9  Protein of unknown function DUF563 family protein contains InterPro domain(s): IPR007657 supported by AK100305
[E] Sorghum bicolorSORBI07701  UniProtKB/TrEMBL C5Z331  jgi|Sorbi1|4770604|estExt_Genewise1.C_chr_105051
[E] Populus trichocarpaPOPTR16179  UniProtKB/TrEMBL B9I2I2  jgi|Poptr1_1|569780|eugene3.00120433
[E] Arabidopsis thalianaARATH12791  UniProtKB/TrEMBL Q84WJ6  expressed protein, contains Pfam domain, PF04577: Protein of unknown function (DUF563); go_component: cellular component unknown [goid GO:0005575@[ND]; GO:0008150@[ND]; GO:0016757@[IEA]; GO:0008372@[NR]] [evidence ND]; go_function: molecular function unknown [goid GO:0005554] [evidence ND]; go_process: biological process unknown [goid GO:0000004] [evidence ND] unknown protein
[E] Vitis viniferaVITVI17951  UniProtKB/TrEMBL A7PH06