List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 206956

Beta-galactosidase
This group has 31 members: 1 [E]ukaryota 30 [B]acteria
Fingerprint: CFLGGFP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Sorghum bicolorSORBI11984   4866526  jgi|Sorbi1|4866526|e_gw1.1484.1.1
[B] Rhodococcus opacus (strain B4)RHOOB05559  UniProtKB/TrEMBL C1AWN8  Beta-galactosidase
[B] Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)KINRD03933  UniProtKB/TrEMBL A6WF44  Beta-galactosidase
[B] Arthrobacter aurescens (strain TC1)ARTAT03155  UniProtKB/TrEMBL A1R9U4  Putative beta-galactosidase
[B] Phytoplasma sp. (strain STRAWB1)STRAW01026  UniProtKB/TrEMBL Q93HN8  Beta-galactosidase
[B] Streptomyces coelicolorSTRCO07359  UniProtKB/TrEMBL Q9L152  SC6D11.03c, probable beta-galactosidase, len: 681 aa. Similar to many beta-galactosidases e.g. Bacillus stearothermophilus SW:BGAL_BACST(EMBL:M13466) beta-galactosidase I (EC 3.2.1.23), BgaB, (672 aa), fasta scores opt: 1816 z-score: 2079.7 E(): 0 43.2% identity in 666 aa overlap. probable beta-galactosidase.
[B] Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083)BIFAA01599  UniProtKB/TrEMBL A1A3V1  probable beta-galactosidase Orthologue of SCO7407 Probable beta-galactosidase(EC 3.2.1.23)
[B] Bifidobacterium longumBIFLO00809  UniProtKB/TrEMBL C2GUS1  Beta-galactosidase I
[B] Bifidobacterium longum (strain DJO10A)BIFLD00910  UniProtKB/TrEMBL B3DTA3  Beta-galactosidase
[B] Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)BACV800173  UniProtKB/TrEMBL A6KWU3  Glycoside hydrolase family 42
[B] Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)HERA203603  UniProtKB/TrEMBL A9B663  Beta-galactosidase
[B] Bacillus clausii (strain KSM-K16)BACSK03500  UniProtKB/TrEMBL Q5WC61  beta-galactosidase
[B] Bacillus pumilus (strain SAFR-032)BACP203554  UniProtKB/TrEMBL A8FJ44  Beta-galactosidase
[B] Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)CLOB801218  UniProtKB/TrEMBL A6LST4  Beta-galactosidase
[B] Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)CLOCE02314  UniProtKB/TrEMBL B8I615  Glycoside hydrolase family 42 domain protein PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: pmo:Pmob_0829 beta-galactosidase
[B] Clostridium perfringensCLOPE00167  UniProtKB/TrEMBL Q8XP01  Beta-galactosidase
[B] Clostridium perfringens (strain ATCC 13124 / NCTC 8237)CLOP100149  UniProtKB/TrEMBL Q0TUR6  beta-galactosidase identified by match to protein family HMM PF02449
[B] Clostridium perfringens (strain SM101)CLOPS00142  UniProtKB/TrEMBL Q0SWK7  beta-galactosidase i identified by match to protein family HMM PF02449
[B] Aeromonas salmonicida (strain A449)AERS402128  UniProtKB/TrEMBL A4SNF4  Beta-galactosidase
[B] Enterobacter sakazakii (strain ATCC BAA-894)ENTS803322  UniProtKB/TrEMBL A7MG65  Putative uncharacterized protein
[B] Klebsiella pneumoniae (strain 342)KLEP304140  UniProtKB/TrEMBL B5Y0Q8  Beta-galactosidase
[B] Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)KLEP700421  UniProtKB/TrEMBL A6T5L2  Putative glycoside hydrolase
[B] Erwinia carotovora (subsp. atroseptica)ERWCT03150  UniProtKB/TrEMBL Q6D2B7  Similar to Clostridium perfringens beta-galactosidase Pbg SWALL:Q59312 (EMBL:D49537) (676 aa) fasta scores: E(): 1.1e-160, 52.44% id in 675 aa, and to Yersinia pestis puative beta-galactosidase BgaB or ypo0852 or y3237 SWALL:Q8ZHN8 (EMBL:AJ414145) (686 aa) fasta scores: E(): 0, 70.26% id in 686 aa beta-galactosidase
[B] Yersinia pestisYERPE00790  UniProtKB/TrEMBL A6BU26  Puative beta-galactosidase
[B] Yersinia pestis (biovar Antiqua strain Antiqua)YERPA00393  UniProtKB/TrEMBL Q1CAY6  Puative beta-galactosidase
[B] Yersinia pestis (biovar Antiqua strain Nepal516)YERPN02923  UniProtKB/TrEMBL Q1CF49  Putative beta-galactosidase
[B] Yersinia pseudotuberculosisYERPS03076  UniProtKB/TrEMBL Q666Z7  Putative beta-galactosidase.
[B] Yersinia pseudotuberculosis (serotype O:1b / strain IP 31758)YERP300888  UniProtKB/TrEMBL A7FF74  Beta-galactosidase
[B] Yersinia pseudotuberculosis serotype IB (strain PB1/+)YERPB03154  UniProtKB/TrEMBL B2JZX1  Glycoside hydrolase family 42 domain protein
[B] Yersinia pseudotuberculosis serotype O:3 (strain YPIII)YERPY00951  UniProtKB/TrEMBL B1JPM5  Beta-galactosidase
[B] Petrotoga mobilis (strain DSM 10674 / SJ95)PETMO00802  UniProtKB/TrEMBL A9BHE4  Beta-galactosidase