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OMA

Keyword Protein Sequence Group Entry

OMA Group 25289

e def
This group has 177 members: 1 [E]ukaryota 1 [A]rchaea 175 [B]acteria
Fingerprint: RQLVDDM

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Populus trichocarpaPOPTR28722   grail3.8458000201  jgi|Poptr1_1|680957|grail3.8458000201 [DNA did not match protein] [DNA partly invalid]
[A] Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z)METLZ00189  UniProtKB/TrEMBL A2SPW1  Hypothetical protein
[B] Acidobacteria bacterium (strain Ellin345)ACIBL04276  UniProtKB/TrEMBL Q1IIL3  Peptide deformylase
[B] Roseiflexus sp. (strain RS-1)ROSS101009  UniProtKB/Swiss-Prot DEF_ROSS1  Peptide deformylase
[B] Clostridium perfringensCLOPE01744  UniProtKB/Swiss-Prot DEF1_CLOPE  Peptide deformylase 1
[B] Clostridium perfringens (strain ATCC 13124 / NCTC 8237)CLOP101953  UniProtKB/TrEMBL Q0TPL0  polypeptide deformylase identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079
[B] Clostridium perfringens (strain SM101)CLOPS01668  UniProtKB/TrEMBL Q0SS77  polypeptide deformylase identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079
[B] Caulobacter sp. (strain K31)CAUSK04487  UniProtKB/Swiss-Prot DEF_CAUSK  Peptide deformylase
[B] Phenylobacterium zucineum (strain HLK1)PHEZH00373  UniProtKB/Swiss-Prot DEF_PHEZH  Polypeptide deformylase
[B] Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)BEII900488  UniProtKB/TrEMBL B2IEV8  Peptide deformylase
[B] Bradyrhizobium japonicumBRAJA08047  UniProtKB/Swiss-Prot DEF_BRAJA  Peptide deformylase
[B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB06854  UniProtKB/Swiss-Prot DEF_BRASB  Peptide deformylase
[B] Bradyrhizobium sp. (strain ORS278)BRASO00717  UniProtKB/Swiss-Prot DEF_BRASO  Peptide deformylase
[B] Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)NITWN02881  UniProtKB/TrEMBL Q3SN29  formylmethionine deformylase
[B] Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)OLICO03489  UniProtKB/Swiss-Prot DEF_OLICO  Peptide deformylase
[B] Rhodopseudomonas palustrisRHOPA00621  UniProtKB/Swiss-Prot DEF_RHOPA  observed by proteomics Citation: Proteomics from VerBerkmoes et al. (2003) unpublished putative N-formylmethionylaminoacyl-tRNA deformylase
[B] Rhodopseudomonas palustris (strain BisB18)RHOPB00793  UniProtKB/Swiss-Prot DEF_RHOPB  Peptide deformylase
[B] Rhodopseudomonas palustris (strain TIE-1)RHOPT00622  UniProtKB/Swiss-Prot DEF_RHOPT  Peptide deformylase
[B] Mesorhizobium sp. (strain BNC1)MESSB00393  UniProtKB/Swiss-Prot DEF_MESSB  peptide deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase KEGG: mlo:mll4855 polypeptide deformylase
[B] Hyphomonas neptunium (strain ATCC 15444)HYPNA00507  UniProtKB/Swiss-Prot DEF_HYPNA  Peptide deformylase
[B] Jannaschia sp. (strain CCS1)JANSC00465  UniProtKB/TrEMBL Q28V79  Peptide deformylase
[B] Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)RHOS402484  UniProtKB/TrEMBL Q3IZH9  Proteomics show homology to Sinorhizobium meliloti peptide deformylase. Citation: Proc. Natl. Acad. Sci. U.S.A. 98 (17), 9877-9882 (2001) Formylmethionine deformylase
[B] Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)RHOS500146  UniProtKB/TrEMBL A4WNU5  Peptide deformylase
[B] Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)RHOS102495  UniProtKB/TrEMBL A3PMR8  peptide deformylase KEGG: rsp:RSP_0872 formylmethionine deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase
[B] Rhodobacter sphaeroides (strain KD131 / KCTC 12085)RHOSK02223  UniProtKB/TrEMBL B9KML4  Peptide deformylase
[B] Acidiphilium cryptum (strain JF-5)ACICJ00402  UniProtKB/TrEMBL A5FVK2  Peptide deformylase precursor
[B] Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)GLUDA02069  UniProtKB/TrEMBL A9HKQ2  Peptide deformylase
[B] Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)RHORT03336  UniProtKB/TrEMBL Q2RP01  Peptide deformylase
[B] Anaplasma phagocytophilum (strain HZ)ANAPZ01202  UniProtKB/TrEMBL Q2GID0  peptide deformylase identified by similarity to SP:P27251; match to protein family HMM PF01327; match to protein family HMM TIGR00079
[B] Ehrlichia ruminantium (strain Gardel)EHRRG00044  UniProtKB/TrEMBL Q5FF48  Similar to sp|Q92IZ1|DEF1_RICCN sp|Q9ZDV8|DEF_RICPR; Ortholog to ERWE_CDS_00450 Peptide deformylase
[B] Ehrlichia ruminantium (strain Welgevonden)EHRRW00045  UniProtKB/TrEMBL Q5HCC3  Similar to sp|Q92IZ1|DEF1_RICCN sp|Q9ZDV8|DEF_RICPR; Ortholog to ERGA_CDS_00440 Peptide deformylase
[B] Rickettsia canadensis (strain McKiel)RICCK00232  UniProtKB/Swiss-Prot DEF_RICCK  Peptide deformylase
[B] Wolbachia pipientis subsp. Culex pipiens (strain wPip)WOLPP00804  UniProtKB/Swiss-Prot DEF_WOLPP  Polypeptide deformylase
[B] Pelagibacter ubiquePELUB00453  UniProtKB/Swiss-Prot DEF_PELUB  peptide deformylase
[B] Bordetella bronchisepticaBORBR00242  UniProtKB/Swiss-Prot DEF1_BORBR  ortholog of Bordetella pertussis (BX470248) BP0552 polypeptide deformylase
[B] Bordetella parapertussisBORPA00241  UniProtKB/Swiss-Prot DEF1_BORPA  ortholog of Bordetella pertussis (BX470248) BP0552 polypeptide deformylase
[B] Bordetella pertussisBORPE00503  UniProtKB/Swiss-Prot DEF2_BORPE  Similar to Escherichia coli polypeptide deformylase Def or Fms or B3287 SW:DEF_ECOLI (P27251) (168 aa) fasta scores: E(): 8.2e-32, 53.846% id in 169 aa, and to Neisseria meningitidis polypeptide deformylase Def or Nma0164 or Nmb0110 TR:Q9JQN0 (EMBL:AL162752) (167 aa) fasta scores: E(): 6.1e-38, 64.848% id in 165 aa. Also similar to BP0039, 40.881% identity (44.218% ungapped) in 159 aa overlap. polypeptide deformylase
[B] Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)BORPD04645  UniProtKB/TrEMBL A9IFQ3  Polypeptide deformylase
[B] Burkholderia ambifaria (strain MC40-6)BURA403032  UniProtKB/TrEMBL B1YPX7  Peptide deformylase
[B] Burkholderia cenocepacia (strain AU 1054)BURCA02487  UniProtKB/TrEMBL Q1BSJ3  Peptide deformylase
[B] Burkholderia cenocepacia (strain HI2424)BURCH03109  UniProtKB/TrEMBL A0KBJ8  peptide deformylase KEGG: bcn:Bcen_2513 peptide deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase
[B] Burkholderia cenocepacia (strain MC0-3)BURCC03114  UniProtKB/TrEMBL B1K0J6  Peptide deformylase
[B] Burkholderia cepacia (strain ATCC 53795 / AMMD)BURCM03168  UniProtKB/TrEMBL Q0BAT5  peptide deformylase KEGG: bur:Bcep18194_A6478 peptide deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase
[B] Burkholderia cepacia (strain J2315 / LMG 16656)BURCJ00458  UniProtKB/TrEMBL B4E7V7  peptide deformylase
[B] Burkholderia multivorans (strain ATCC 17616 / 249)BURM100442  UniProtKB/TrEMBL A9AC70  Peptide deformylase
[B] Burkholderia sp. (strain 383)BURS303283  UniProtKB/TrEMBL Q39BU4  Peptide deformylase
[B] Burkholderia vietnamiensis (strain G4 / LMG 22486)BURVG03180  UniProtKB/TrEMBL A4JJ23  Peptide deformylase
[B] Burkholderia malleiBURMA00112  UniProtKB/TrEMBL A5TRD3  Polypeptide deformylase
[B] Burkholderia mallei (strain NCTC 10229)BURM902137  UniProtKB/TrEMBL A2S8G8  Polypeptide deformylase
[B] Burkholderia mallei (strain NCTC 10247)BURM702181  UniProtKB/TrEMBL A3MNP3  Polypeptide deformylase
[B] Burkholderia mallei (strain SAVP1)BURMS02635  UniProtKB/TrEMBL A1V798  Polypeptide deformylase
[B] Burkholderia phymatum (strain DSM 17167 / STM815)BURP800033  UniProtKB/TrEMBL B2JJU3  Peptide deformylase
[B] Burkholderia phytofirmans (strain DSM 17436 / PsJN)BURPP00267  UniProtKB/TrEMBL B2T1K5  Peptide deformylase
[B] Burkholderia pseudomalleiBURPS00123  UniProtKB/TrEMBL A8KKE2  Similar to Escherichia coli peptide deformylase Def or Fms SWALL:DEF_ECOLI (SWALL:P27251) (168 aa) fasta scores: E(): 1.1e-34, 58.53% id in 164 aa, and to Ralstonia solanacearum probable polypeptide deformylase protein rsc0070 or rs02248 SWALL:Q8Y3B0 (EMBL:AL646057) (169 aa) fasta scores: E(): 5.8e-50, 80.35% id in 168 aa peptide deformylase
[B] Burkholderia pseudomallei (strain 1106a)BURP000153  UniProtKB/TrEMBL A3NQ22  Polypeptide deformylase
[B] Burkholderia pseudomallei (strain 1710b)BURP100334  UniProtKB/TrEMBL Q3JXE2  peptide deformylase identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079
[B] Burkholderia pseudomallei (strain 668)BURP600149  UniProtKB/TrEMBL A3N4D3  Polypeptide deformylase
[B] Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)BURTA00125  UniProtKB/TrEMBL Q2T2B2  peptide deformylase identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079
[B] Burkholderia xenovorans (strain LB400)BURXL00043  UniProtKB/TrEMBL Q147A5  Peptide deformylase
[B] Cupriavidus taiwanensis (strain R1 / LMG 19424)CUPTR03078  UniProtKB/TrEMBL B3R823  Peptide deformylase
[B] Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)RALEH03598  UniProtKB/TrEMBL Q0K5G5  formylmethionine deformylase
[B] Ralstonia eutropha (strain JMP134)RALEJ03374  UniProtKB/TrEMBL Q46VR8  Formylmethionine deformylase
[B] Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)RALME03486  UniProtKB/TrEMBL Q1LHD9  formylmethionine deformylase
[B] Polynucleobacter necessarius (strain STIR1)POLNS01499  UniProtKB/Swiss-Prot DEF_POLNS  Peptide deformylase
[B] Polynucleobacter sp. (strain QLW-P1DMWA-1)POLSQ02065  UniProtKB/TrEMBL A4T0M6  Peptide deformylase
[B] Ralstonia pickettii (strain 12J)RALPJ03564  UniProtKB/TrEMBL B2U797  Peptide deformylase
[B] Polaromonas naphthalenivorans (strain CJ2)POLNA03802  UniProtKB/TrEMBL A1VU46  Peptide deformylase
[B] Polaromonas sp. (strain JS666 / ATCC BAA-500)POLSJ04542  UniProtKB/TrEMBL Q122M0  Peptide deformylase
[B] Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)RHOFD03779  UniProtKB/TrEMBL Q21RP4  Peptide deformylase
[B] Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6)LEPCP00349  UniProtKB/TrEMBL B1XW98  Peptide deformylase
[B] Methylibium petroleiphilum (strain PM1)METPP00283  UniProtKB/TrEMBL A2SCF6  Peptide deformylase
[B] Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis)JANMA00143  UniProtKB/TrEMBL A6SU86  Polypeptide deformylase
[B] Methylobacillus flagellatus (strain KT / ATTC 51484 / DSM 6875)METFK00187  UniProtKB/TrEMBL Q1H4X9  Peptide deformylase
[B] Chromobacterium violaceumCHRVO04256  UniProtKB/Swiss-Prot DEF_CHRVO  identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0242 Polypeptide deformylase
[B] Laribacter hongkongensis (strain HLHK9)LARHH03097  UniProtKB/TrEMBL C1D690  Def
[B] Nitrosomonas europaeaNITEU01911  UniProtKB/Swiss-Prot DEF2_NITEU  Formylmethionine deformylase
[B] Nitrosomonas eutropha (strain C71)NITEC00371  UniProtKB/TrEMBL Q0AJ01  peptide deformylase KEGG: neu:NE1970 formylmethionine deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase
[B] Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849)NITMU00381  UniProtKB/TrEMBL Q2YC19  Peptide deformylase
[B] Azoarcus sp. (strain BH72)AZOSB00099  UniProtKB/TrEMBL A1K1L2  probable peptide deformylase Probable peptide deformylase (EC 3.5.1.88). Homology to def of E. coli of 54% (sprot|DEF_ECOLI(SRS)). Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions Interpro: Formylmethionine deformylase (IPR000181) Pfam: Polypeptide deformylase Tigrfam: pept_deformyl: polypeptide deformylase no signal peptide no TMHs High confidence in function and specificity
[B] Dechloromonas aromatica (strain RCB)DECAR00021  UniProtKB/TrEMBL Q47K51  Formylmethionine deformylase
[B] Anaeromyxobacter dehalogenans (strain 2CP-C)ANADE00721  UniProtKB/TrEMBL Q2INW9  peptide deformylase
[B] Anaeromyxobacter sp. (strain Fw109-5)ANADF00760  UniProtKB/TrEMBL A7H8D4  Peptide deformylase
[B] Myxococcus xanthus (strain DK 1622)MYXXD01378  UniProtKB/TrEMBL Q1DCD6  peptide deformylase identified by similarity to SP:P27251; match to protein family HMM PF01327; match to protein family HMM TIGR00079
[B] Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A)CAMHC00018  UniProtKB/TrEMBL A7HZE9  Peptide deformylase
[B] Alteromonas macleodii (strain DSM 17117 / Deep ecotype)ALTMD00022  UniProtKB/Swiss-Prot DEF_ALTMD  N-terminal methionine peptide deformylase
[B] Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8)MARAV00040  UniProtKB/TrEMBL A1TWN1  peptide deformylase KEGG: sde:Sde_0021 peptide deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase
[B] Colwellia psychrerythraea (strain 34H / ATCC BAA-681)COLP300020  UniProtKB/TrEMBL Q48AS8  identified by similarity to SP:P27251; match to protein family HMM PF01327; match to protein family HMM TIGR00079 polypeptide deformylase
[B] Pseudoalteromonas haloplanktis (strain TAC 125)PSEHT00023  UniProtKB/Swiss-Prot DEF_PSEHT  Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9374870; Product type e : enzyme N-terminal methionine peptide deformylase
[B] Psychromonas ingrahamii (strain 37)PSYIN00075  UniProtKB/TrEMBL A1SR37  peptide deformylase KEGG: vvy:VV3225 N-formylmethionyl-tRNA deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase
[B] Shewanella baltica (strain OS155 / ATCC BAA-1091)SHEB500031  UniProtKB/TrEMBL A3CYK5  Peptide deformylase
[B] Shewanella baltica (strain OS185)SHEB800027  UniProtKB/TrEMBL A6WHB1  Peptide deformylase
[B] Shewanella baltica (strain OS195)SHEB900031  UniProtKB/TrEMBL A9KUA2  KEGG: son:SO_0032 polypeptide deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase peptide deformylase
[B] Shewanella baltica (strain OS223)SHEB200031  UniProtKB/TrEMBL B8E3S4  Peptide deformylase
[B] Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)SHEDO00024  UniProtKB/TrEMBL Q12TA5  Peptide deformylase
[B] Shewanella oneidensisSHEON00032  UniProtKB/Swiss-Prot DEF1_SHEON  Peptide deformylase 1
[B] Shewanella pealeana (strain ANG-SQ1 / ATCC 700345)SHEPA00027  UniProtKB/TrEMBL A8GYH3  KEGG: slo:Shew_3736 peptide deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase peptide deformylase
[B] Shewanella piezotolerans (strain WP3 / JCM 13877)SHEPW00055  UniProtKB/TrEMBL B8CHB2  Peptide deformylase
[B] Shewanella sediminis (strain HAW-EB3)SHESH00035  UniProtKB/TrEMBL A8FP75  KEGG: slo:Shew_3736 peptide deformylase Peptide deformylase
[B] Shewanella sp. (strain ANA-3)SHESA00035  UniProtKB/TrEMBL A0KR61  peptide deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase KEGG: son:SO0032 polypeptide deformylase
[B] Shewanella sp. (strain MR-4)SHESM00029  UniProtKB/TrEMBL Q0HPA6  Peptide deformylase
[B] Shewanella sp. (strain MR-7)SHESR00027  UniProtKB/TrEMBL Q0I0S2  Peptide deformylase
[B] Baumannia cicadellinicola (subsp. Homalodisca coagulata)BAUCH00379  UniProtKB/Swiss-Prot DEF_BAUCH  peptide deformylase identified by similarity to SP:P27251; match to protein family HMM PF01327; match to protein family HMM TIGR00079
[B] Thioalkalivibrio sp. (strain HL-EbGR7)THISH00187  UniProtKB/Swiss-Prot DEF_THISH  Peptide deformylase
[B] Buchnera aphidicola (subsp. Acyrthosiphon pisum)BUCAI00461  UniProtKB/Swiss-Prot DEF_BUCAI  polypeptide deformylase
[B] Buchnera aphidicola (subsp. Baizongia pistaciae)BUCBP00401  UniProtKB/Swiss-Prot DEF_BUCBP  COG0242; PDF; formylmethionine deformylase polypeptide deformylase
[B] Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A)BUCA500454  UniProtKB/Swiss-Prot DEF_BUCA5  Peptide deformylase
[B] Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7)BUCAT00452  UniProtKB/Swiss-Prot DEF_BUCAT  Peptide deformylase
[B] Escherichia coli O139:H28 (strain E24377A / ETEC)ECO2404779  UniProtKB/TrEMBL A7ZGN7  Peptide deformylase
[B] Klebsiella pneumoniae (strain 342)KLEP300426  UniProtKB/Swiss-Prot DEF_KLEP3  Peptide deformylase
[B] Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)KLEP703634  UniProtKB/Swiss-Prot DEF_KLEP7  Peptide deformylase
[B] Erwinia carotovora (subsp. atroseptica)ERWCT03963  UniProtKB/Swiss-Prot DEF_ERWCT  Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 peptide deformylase Def or Fms or b3287 or c4047 or z4657 or ecs4152 SWALL:DEF_ECOLI (SWALL:P27251) (168 aa) fasta scores: E(): 1.2e-50, 83.83% id in 167 aa peptide deformylase
[B] Photorhabdus luminescens (subsp. laumondii)PHOLL04541  UniProtKB/Swiss-Prot DEF_PHOLL  polypeptide deformylase (PDF) (formylmethionine deformylase)
[B] Serratia proteamaculans (strain 568)SERP504482  UniProtKB/Swiss-Prot DEF_SERP5  Peptide deformylase
[B] Wigglesworthia glossinidia brevipalpisWIGBR00496  UniProtKB/Swiss-Prot DEF_WIGBR  Protein fate
[B] Candidatus Blochmannia floridanusBLOFL00206  UniProtKB/Swiss-Prot DEF_BLOFL  COG caterory=J polypeptide deformylase
[B] Methylococcus capsulatusMETCA02667  UniProtKB/TrEMBL Q603G3  identified by similarity to SP:P27251; match to protein family HMM PF01327; match to protein family HMM TIGR00079 polypeptide deformylase
[B] Hahella chejuensis (strain KCTC 2396)HAHCH00030  UniProtKB/Swiss-Prot DEF_HAHCH  peptide deformylase TIGRFAMsMatches:TIGR00079
[B] Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)CHRSD02848  UniProtKB/Swiss-Prot DEF_CHRSD  Peptide deformylase
[B] Marinomonas sp. (strain MWYL1)MARMS00017  UniProtKB/TrEMBL A6VR81  Peptide deformylase
[B] Actinobacillus pleuropneumoniae serotype 3 (strain JL03)ACTPJ01680  UniProtKB/TrEMBL B0BSD8  Peptide deformylase
[B] Actinobacillus pleuropneumoniae serotype 5b (strain L20)ACTP201677  UniProtKB/TrEMBL A3N309  Peptide deformylase
[B] Actinobacillus pleuropneumoniae serotype 7 (strain AP76)ACTP701740  UniProtKB/Swiss-Prot DEF_ACTP7  Peptide deformylase
[B] Haemophilus ducreyiHAEDU01570  UniProtKB/Swiss-Prot DEF_HAEDU  formylmethionine deformylase peptide deformylase
[B] Haemophilus influenzaeHAEIN00608  UniProtKB/Swiss-Prot DEF_HAEIN  Peptide deformylase
[B] Haemophilus influenzae (strain 86-028NP)HAEI800636  UniProtKB/Swiss-Prot DEF_HAEI8  PDF; polypeptide deformylase; Similar to: HI0622, DEF_HAEIN peptide deformylase
[B] Haemophilus influenzae (strain PittEE)HAEIE01607  UniProtKB/Swiss-Prot DEF_HAEIE  Peptide deformylase
[B] Haemophilus influenzae (strain PittGG)HAEIG01017  UniProtKB/Swiss-Prot DEF_HAEIG  Putative uncharacterized protein
[B] Haemophilus parasuis serovar 5 (strain SH0165)HAEPS01404  UniProtKB/Swiss-Prot DEF_HAEPS  Peptide deformylase
[B] Acinetobacter baumannii (strain AB0057)ACIB500199  UniProtKB/TrEMBL B7I1X5  Peptide deformylase
[B] Acinetobacter baumannii (strain AB307-0294)ACIB303279  UniProtKB/TrEMBL B7H283  Peptide deformylase
[B] Acinetobacter baumannii (strain ACICU)ACIBC00190  UniProtKB/TrEMBL B2I114  N-formylmethionyl-tRNA deformylase
[B] Acinetobacter baumannii (strain AYE)ACIBY03408  UniProtKB/TrEMBL B0VCB4  Peptide deformylase 1
[B] Acinetobacter baumannii (strain SDF)ACIBS00151  UniProtKB/Swiss-Prot DEF_ACIBS  Peptide deformylase 1
[B] Acinetobacter sp. (strain ADP1)ACIAD00196  UniProtKB/TrEMBL Q6FFH6  Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme peptide deformylase 1 (N-formylmethionylaminoacyl-tRNA deformylase, binds Zn(II))
[B] Psychrobacter arcticus (strain DSM 17307 / 273-4)PSYA200028  UniProtKB/Swiss-Prot DEF_PSYA2  Peptide deformylase
[B] Psychrobacter sp. (strain PRwf-1)PSYWF00042  UniProtKB/Swiss-Prot DEF_PSYWF  Peptide deformylase
[B] Cellvibrio japonicus (strain Ueda107)CELJU03474  UniProtKB/Swiss-Prot DEF_CELJU  Peptide deformylase
[B] Pseudomonas aeruginosaPSEAE00019  UniProtKB/Swiss-Prot DEF_PSEAE  Peptide deformylase
[B] Pseudomonas aeruginosa (strain LESB58)PSEA800019  UniProtKB/TrEMBL B7V0Q4  Peptide deformylase
[B] Pseudomonas aeruginosa (strain PA7)PSEA700020  UniProtKB/TrEMBL A6UX81  Peptide deformylase
[B] Pseudomonas aeruginosa (strain UCBPP-PA14)PSEAB00019  UniProtKB/TrEMBL Q02V62  polypeptide deformylase
[B] Pseudomonas entomophila (strain L48)PSEE400022  UniProtKB/TrEMBL Q1I2G5  peptide deformylase 1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme
[B] Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)PSEF500022  UniProtKB/TrEMBL Q4KKQ9  identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079 polypeptide deformylase
[B] Pseudomonas fluorescens (strain PfO-1)PSEPF00017  UniProtKB/TrEMBL Q3KKE5  Formylmethionine deformylase
[B] Pseudomonas mendocina (strain ymp)PSEMY00053  UniProtKB/Swiss-Prot DEF_PSEMY  Peptide deformylase
[B] Pseudomonas putida (strain F1 / ATCC 700007)PSEP100082  UniProtKB/TrEMBL A5VWJ9  Peptide deformylase
[B] Pseudomonas putida (strain GB-1)PSEPG00084  UniProtKB/TrEMBL B0KF30  peptide deformylase unknown EC_number=3.5.1.88 KEGG: pen:PSEEN0025 peptide deformylase 1 TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase
[B] Pseudomonas putida (strain KT2440)PSEPK00068  UniProtKB/Swiss-Prot DEF1_PSEPK  identified by match to TIGR protein family HMM TIGR00079 polypeptide deformylase
[B] Pseudomonas putida (strain W619)PSEPW00087  UniProtKB/TrEMBL B1J433  Peptide deformylase
[B] Pseudomonas stutzeri (strain A1501)PSEU500021  UniProtKB/Swiss-Prot DEF_PSEU5  Polypeptide deformylase
[B] Pseudomonas syringae (pv. tomato)PSESM00167  UniProtKB/Swiss-Prot DEF1_PSESM  similar to SP:P27251; identified by sequence similarity; putative polypeptide deformylase
[B] Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)PSE1400017  UniProtKB/TrEMBL Q48QI1  identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079 peptide deformylase
[B] Pseudomonas syringae pv. syringae (strain B728a)PSEU200019  UniProtKB/TrEMBL Q500S9  Formylmethionine deformylase
[B] Thiomicrospira crunogena (strain XCL-2)THICR00192  UniProtKB/Swiss-Prot DEF_THICR  Peptide deformylase
[B] Vibrio fischeri (strain MJ11)VIBFM02553  UniProtKB/Swiss-Prot DEF_VIBFM  Peptide deformylase
[B] Vibrio choleraeVIBCH00046  UniProtKB/Swiss-Prot DEF1_VIBCH  similar to SP:P27251 GB:X77800 PID:41474 PID:443989 PID:471304; identified by sequence similarity; putative polypeptide deformylase
[B] Vibrio cholerae (strain ATCC 39541 / O395)VIBC302311  UniProtKB/TrEMBL A5F4B3  Polypeptide deformylase
[B] Vibrio cholerae serotype O1 (strain M66-2)VIBCM00046  UniProtKB/TrEMBL C3LPB9  
[B] Vibrio fischeri (strain ATCC 700601 / ES114)VIBF102531  UniProtKB/Swiss-Prot DEF_VIBF1  peptide deformylase
[B] Vibrio harveyi (strain ATCC BAA-1116 / BB120)VIBHB00306  UniProtKB/Swiss-Prot DEF_VIBHB  Putative uncharacterized protein
[B] Vibrio parahaemolyticusVIBPA03036  UniProtKB/Swiss-Prot DEF1_VIBPA  similar to GB:AAF93224.1 (AE004095) percent identity 88 in 169 aa polypeptide deformylase
[B] Vibrio splendidus (strain LGP32)VIBSL02900  UniProtKB/TrEMBL B7VMX1  Peptide deformylase
[B] Vibrio vulnificusVIBVU00967  UniProtKB/Swiss-Prot DEF1_VIBVU  COG0242 N-formylmethionyl-tRNA deformylase
[B] Vibrio vulnificus (strain YJ016)VIBVY03192  UniProtKB/Swiss-Prot DEF2_VIBVY  Peptide deformylase 2
[B] Stenotrophomonas maltophilia (strain K279a)STRMK03922  UniProtKB/Swiss-Prot DEF_STRMK  Putative peptide deformylase
[B] Stenotrophomonas maltophilia (strain R551-3)STRM503566  UniProtKB/Swiss-Prot DEF_STRM5  Peptide deformylase
[B] Xanthomonas axonopodis (pv. citri)XANAC03699  UniProtKB/Swiss-Prot DEF2_XANAC  identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark polypeptide deformylase
[B] Xanthomonas campestris pv. campestrisXANCP03644  UniProtKB/Swiss-Prot DEF2_XANCP  Peptide deformylase 2
[B] Xanthomonas campestris pv. campestris (strain 8004)XANC803711  UniProtKB/TrEMBL Q4UQ14  polypeptide deformylase
[B] Xanthomonas campestris pv. campestris (strain B100)XANCB03914  UniProtKB/TrEMBL B0RWQ8  Peptide deformylase
[B] Xanthomonas campestris pv. vesicatoria (strain 85-10)XANC503837  UniProtKB/TrEMBL Q3BNK6  peptide deformylase
[B] Xylella fastidiosaXYLFA00920  UniProtKB/Swiss-Prot DEF_XYLFA  similar to SP|P27251 (percent identity: 55 %/query alignment coverage: 98.2 %/subject alignment coverage: 98.8 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder polypeptide deformylase
[B] Xylella fastidiosa (strain M12)XYLFM01700  UniProtKB/Swiss-Prot DEF_XYLFM  Peptide deformylase
[B] Xylella fastidiosa (strain M23)XYLF201764  UniProtKB/Swiss-Prot DEF_XYLF2  Peptide deformylase
[B] Xylella fastidiosa (strain Temecula1 / ATCC 700964)XYLFT01657  UniProtKB/Swiss-Prot DEF_XYLFT  Peptide deformylase
[B] Ruthia magnifica subsp. Calyptogena magnificaRUTMC00871  UniProtKB/TrEMBL A1AXL8  Peptide deformylase
[B] Magnetococcus sp. (strain MC-1)MAGSM00136  UniProtKB/TrEMBL A0L3X6  peptide deformylase KEGG: rru:Rru_A3350 peptide deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase