List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 356658

Putative uncharacterized protein
This group has 8 members: 8 [B]acteria
Fingerprint: LTWTPEV

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacteroides fragilisBACFR00921  UniProtKB/Swiss-Prot GLAB_BACFR  Alpha-1,3-galactosidase B
[B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)BACFN00807  UniProtKB/Swiss-Prot GLAB_BACFN  Similar to Bacteroides thetaiotaomicron hypothetical protein BT4251 SWALL:AAO79356 (EMBL:AE016944) (615 aa) fasta scores: E(): 5.4e-59, 36.46% id in 606 aa, and to Bacteroides thetaiotaomicron hypothetical protein BT3160 SWALL:AAO78266 (EMBL:AE016939) (568 aa) fasta scores: E(): 8.4e-40, 30.42% id in 562 aa conserved hypothetical protein, possible ATP/GTP-binding site
[B] Bacteroides thetaiotaomicronBACTN04205  UniProtKB/Swiss-Prot GLAB_BACTN  Alpha-1,3-galactosidase B
[B] Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)BACV800101  UniProtKB/Swiss-Prot GLAB1_BACV8  Putative uncharacterized protein
[B] Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)PARD802734  UniProtKB/Swiss-Prot GLAB_PARD8  Putative uncharacterized protein
[B] Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845)CAPOD00196  UniProtKB/TrEMBL C7M563  ATP/GTP-binding site
[B] Shewanella woodyi (strain ATCC 51908 / MS32)SHEWM03603  UniProtKB/Swiss-Prot GLAA_SHEWM  Putative uncharacterized protein precursor
[B] Akkermansia muciniphila (strain ATCC BAA-835)AKKM800471  UniProtKB/Swiss-Prot GLAB_AKKM8  Alpha-1,3-galactosidase B precursor