List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 46951

glycogen synthase
This group has 15 members: 2 [A]rchaea 13 [B]acteria
Fingerprint: WGLHDAY

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Methanococcus maripaludis (strain C6 / ATCC BAA-1332)METM601366  UniProtKB/TrEMBL A9AA20  Starch synthase
[A] Methanococcus maripaludis (strain C7 / ATCC BAA-1331)METM700533  UniProtKB/TrEMBL A6VGN1  Starch synthase
[B] Chlamydia muridarumCHLMU00174  UniProtKB/Swiss-Prot GLGA_CHLMU  similar to GB:M80245, SP:P31112, PID:143801, and GB:AL009126; identified by sequence similarity; putative glycogen synthase
[B] Chlamydia trachomatisCHLTR00817  UniProtKB/Swiss-Prot GLGA_CHLTR  Glycogen Synthase
[B] Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B)CHLTA00830  UniProtKB/Swiss-Prot GLGA_CHLTA  glycogen synthase
[B] Chlamydia trachomatis (strain L2/434/Bu / ATCC VR902B)CHLT200168  UniProtKB/Swiss-Prot GLGA_CHLT2  Glycogen synthase
[B] Chlamydia trachomatis (strain L2b/UCH-1/proctitis)CHLTB00168  UniProtKB/Swiss-Prot GLGA_CHLTB  Glycogen synthase
[B] Chlamydophila felis (strain Fe/C-56)CHLFF00193  UniProtKB/Swiss-Prot GLGA_CHLFF  glycogen synthase EC 2.4.1.21
[B] Acaryochloris marina (strain MBIC 11017)ACAM101020  UniProtKB/TrEMBL B0C2U1  Glycogen synthase
[B] Cyanothece sp. (strain PCC 7425 / ATCC 29141)CYAP401706  UniProtKB/TrEMBL B8HT99  Glycogen/starch synthase, ADP-glucose type
[B] Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)SYNP202087  UniProtKB/TrEMBL B1XIC2  Glycogen synthase 2
[B] Synechococcus sp. (strain JA-2-3B'a(2-13))SYNJB00620  UniProtKB/Swiss-Prot GLGA1_SYNJB  glycogen/starch synthase, ADP-glucose type identified by match to protein family HMM PF00534; match to protein family HMM TIGR02095
[B] Synechococcus sp. (strain JA-3-3Ab)SYNJA01930  UniProtKB/Swiss-Prot GLGA1_SYNJA  glycogen/starch synthase, ADP-glucose type identified by match to protein family HMM PF00534; match to protein family HMM TIGR02095
[B] Synechocystis sp. (strain PCC 6803)SYNY300045  UniProtKB/Swiss-Prot GLGA2_SYNY3  Probable glycogen synthase 2
[B] Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)NITOC00075  UniProtKB/Swiss-Prot GLGA1_NITOC  Glycogen/starch synthases, ADP-glucose type