List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 1606

glutamyl-tRNA synthetase
This group has 13 members: 3 [E]ukaryota 10 [B]acteria
Fingerprint: CNAIDDA

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Populus trichocarpaPOPTR39832  UniProtKB/TrEMBL B9HPM4  jgi|Poptr1_1|803960|fgenesh4_pm.C_LG_IX000007
[E] Arabidopsis thalianaARATH26116  UniProtKB/Swiss-Prot SYE_ARATH  glutamate-tRNA ligase family protein / glutamyl-tRNA synthetase family protein, similar to SP|P22250 from Bacillus subtilis, SP|P22249 from Bacillus stearothermophilus; contains Pfam tRNA synthetases class I (E and Q), catalytic domain PF00749; go_component: cytoplasm [goid GO:0004818@[ISS]; GO:0005739@[IDA]; GO:0006424@[ISS]; GO:0007005@[TAS]; GO:0009507@[IDA]; GO:0009658@[TAS]; GO:0043039@[TAS]; GO:0048481@[IMP]] [evidence IEA]; go_component: mitochondrion [goid GO:0005739] [evidence IEA]; go_function: glutamate-tRNA ligase activity [goid GO:0004818] [evidence ISS] [pmid 2120226]; go_process: tRNA aminoacylation for protein translation [goid GO:0006418] [evidence IEA]; go_process: glutamyl-tRNA aminoacylation [goid GO:0006424] [evidence IEA] glutamate-tRNA ligase
[E] Vitis viniferaVITVI19116  UniProtKB/TrEMBL A7P8T4  
[B] Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E)THEP300324  UniProtKB/Swiss-Prot SYE1_THEP3  Glutamyl-tRNA synthetase
[B] Thermoanaerobacter sp. (strain X514)THEPX00807  UniProtKB/Swiss-Prot SYE1_THEPX  Glutamyl-tRNA synthetase
[B] Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455)ACIF202086  UniProtKB/TrEMBL B7J5K9  Glutamyl-tRNA synthetase
[B] Acidithiobacillus ferrooxidans (strain ATCC 53993)ACIF501784  UniProtKB/Swiss-Prot SYE2_ACIF5  Glutamyl-tRNA synthetase
[B] Halorhodospira halophila (strain DSM 244 / SL1)HALHL00107  UniProtKB/Swiss-Prot SYE1_HALHL  Glutamyl-tRNA synthetase
[B] Coxiella burnetiiCOXBU01403   NP_820471.1  similar to GB:X52882, GB:M26885, GB:M27271, GB:X14983, GB:X14987, SP:P17987, PID:339211, PID:36796, and PID:553729; identified by sequence similarity; putative glutamyl-tRNA synthetase
[B] Coxiella burnetii (strain CbuG_Q212)COXB200453  UniProtKB/Swiss-Prot SYE1_COXB2  Glutamyl-tRNA synthetase 1
[B] Coxiella burnetii (strain Dugway 5J108-111)COXBN00497  UniProtKB/Swiss-Prot SYE1_COXBN  Glutamyl-tRNA synthetase
[B] Coxiella burnetii (strain RSA 331 / Henzerling II)COXBR01373  UniProtKB/Swiss-Prot SYE2_COXBR  Glutamyl-tRNA synthetase
[B] Methylococcus capsulatusMETCA00485  UniProtKB/Swiss-Prot SYE1_METCA  identified by similarity to SP:P22250; match to protein family HMM PF00749; match to protein family HMM TIGR00464 glutamyl-tRNA synthetase