List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 376979

Lacto-N-neotetraose biosynthesis glycosyl transferase lgtB
This group has 8 members: 8 [B]acteria
Fingerprint: ASELMIL

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Brucella abortusBRUAB00585  UniProtKB/TrEMBL C9UBT2  similar to BR0615, membrane protein, hypothetical hypothetical membrane protein
[B] Brucella abortus (strain 2308)BRUA200633  UniProtKB/TrEMBL Q2YMX2  Glycosyl transferase, family 25:O-antigen polymerase
[B] Brucella abortus (strain S19)BRUA100564  UniProtKB/TrEMBL B2SAA0  LPSA protein
[B] Brucella canis (strain ATCC 23365 / NCTC 10854)BRUC200593  UniProtKB/TrEMBL A9M9P2  Lacto-N-neotetraose biosynthesis glycosyl transferase lgtB
[B] Brucella melitensisBRUME01316  UniProtKB/TrEMBL Q8YG36  LPSA PROTEIN
[B] Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)BRUO200546  UniProtKB/TrEMBL A5VPG1  Putative membrane protein
[B] Brucella suisBRUSU00584  UniProtKB/TrEMBL D0BCC3  similar to GP:15156909; identified by sequence similarity; putative membrane protein, putative
[B] Brucella suis (strain ATCC 23445 / NCTC 10510)BRUSI00605  UniProtKB/TrEMBL B0CKU4  Lacto-N-neotetraose biosynthesis glycosyl transferase lgtB GO_process: lipopolysaccharide biosynthetic process [GO ID 0009103]