List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 17576

acid dehydrogenase
This group has 15 members: 15 [B]acteria
Fingerprint: AQWRWLL

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Rhizobium leguminosarum bv. trifolii (strain WSM2304)RHILW00121  UniProtKB/TrEMBL B5ZNR4  D-amino-acid dehydrogenase
[B] Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)RALME04328  UniProtKB/TrEMBL Q1LEX0  FAD dependent oxidoreductase
[B] Acidovorax avenae subsp. citrulli (strain AAC00-1)ACIAC01857  UniProtKB/TrEMBL A1TNI2  D-amino-acid dehydrogenase PFAM: FAD dependent oxidoreductase KEGG: pol:Bpro_1999 D-amino-acid dehydrogenase
[B] Delftia acidovorans (strain DSM 14801 / SPH-1)DELAS00069  UniProtKB/TrEMBL A9BQL4  D-amino-acid dehydrogenase
[B] Polaromonas sp. (strain JS666 / ATCC BAA-500)POLSJ01955  UniProtKB/TrEMBL Q12C13  D-amino-acid dehydrogenase
[B] Verminephrobacter eiseniae (strain EF01-2)VEREI04602  UniProtKB/TrEMBL A1WS26  D-amino-acid dehydrogenase
[B] Pseudomonas aeruginosaPSEAE05071  UniProtKB/Swiss-Prot DADA2_PSEAE  D-amino acid dehydrogenase 2 small subunit
[B] Pseudomonas aeruginosa (strain LESB58)PSEA805446  UniProtKB/TrEMBL B7V3H7  Probable oxidoreductase
[B] Pseudomonas aeruginosa (strain PA7)PSEA705706  UniProtKB/TrEMBL A6VDK7  Probable oxidoreductase
[B] Pseudomonas aeruginosa (strain UCBPP-PA14)PSEAB05392  UniProtKB/TrEMBL Q02ET3  putative amino acid oxidase
[B] Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)PSEF505712  UniProtKB/TrEMBL Q4K4G7  identified by similarity to SP:P29011; match to protein family HMM PF01266 D-amino acid dehydrogenase, small subunit
[B] Pseudomonas putida (strain F1 / ATCC 700007)PSEP101532  UniProtKB/TrEMBL A5W0Q3  D-amino-acid dehydrogenase precursor
[B] Pseudomonas putida (strain GB-1)PSEPG03840  UniProtKB/TrEMBL B0KQ12  D-amino-acid dehydrogenase unknown EC_number=1.4.99.1 PFAM: FAD dependent oxidoreductase KEGG: pen:PSEEN1658 D-amino acid dehydrogenase, small subunit
[B] Pseudomonas putida (strain KT2440)PSEPK04228  UniProtKB/TrEMBL Q88EY9  similar to GB:X12534, SP:P10114, PID:35861, and PID:412184; identified by sequence similarity; putative D-amino acid dehydrogenase, small subunit, putative
[B] Pseudomonas putida (strain W619)PSEPW03612  UniProtKB/TrEMBL B1JC68  D-amino-acid dehydrogenase