List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 225952

glycosyl hydrolase
This group has 5 members: 5 [B]acteria
Fingerprint: FINNANG

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Clostridium acetobutylicumCLOAB02579  UniProtKB/TrEMBL Q97FV5  Cell wall hydrolase (autolysin), family 25 of glycosyl hydrolases; peptodoglycan-binding domain
[B] Clostridium botulinum (strain Langeland / NCTC 10281 / Type F)CLOBL00755  UniProtKB/TrEMBL A7GBG4  Glycosyl hydrolase, family 25
[B] Clostridium botulinum (strain Loch Maree / Type A3)CLOBM03722  UniProtKB/TrEMBL B1L2F8  LycA
[B] Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)CLOK503094  UniProtKB/TrEMBL A5N2A0  Predicted glycosyl hydrolase
[B] Clostridium novyi (strain NT)CLONN01187  UniProtKB/TrEMBL A0Q0M0  glycosyl hydrolase, family 25 identified by match to protein family HMM PF01183; match to protein family HMM PF01471