List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 274873

family 9
This group has 6 members: 5 [E]ukaryota 1 [B]acteria
Fingerprint: DGNADHQ

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Oryza sativaORYSA19700   BAF23627.1  Cellulase (Endo-beta-1,4-glucanase) (EC 3.2.1.4) contains InterPro domain(s): IPR001701, IPR008928 has GO asignment(s): GO:0005975@[NR] similar to Q96545 supported by AK071784
[E] Sorghum bicolorSORBI23157   5007778  jgi|Sorbi1|5007778|estExt_fgenesh1_pg.C_chr_71214
[E] Populus trichocarpaPOPTR39202  UniProtKB/TrEMBL B9GKC9  jgi|Poptr1_1|797347|fgenesh4_pm.C_LG_I000350
[E] Arabidopsis thalianaARATH18590  UniProtKB/Swiss-Prot GUN20_ARATH  glycosyl hydrolase family 9 protein, similar to cellulase GI:1039431 from (Phaseolus vulgaris); go_component: endomembrane system [goid GO:0004553@[IEA,ISS]; GO:0005975@[IEA]; GO:0012505@[IEA]] [evidence IEA]; go_function: hydrolase activity, hydrolyzing O-glycosyl compounds [goid GO:0004553] [evidence IEA]; go_function: hydrolase activity, hydrolyzing O-glycosyl compounds [goid GO:0004553] [evidence ISS]; go_process: carbohydrate metabolism [goid GO:0005975] [evidence IEA] hydrolase, hydrolyzing O-glycosyl compounds
[E] Vitis viniferaVITVI10389  UniProtKB/TrEMBL A7QNH8  
[B] Clostridium acetobutylicumCLOAB00905  UniProtKB/TrEMBL Q97KK3  Possible non-processive endoglucanase family 9, secreted; CelG ortholog; dockerin and cellulose-binding domain