List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 16434

synthase III
This group has 13 members: 13 [B]acteria
Fingerprint: QANIGAK

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Phytoplasma sp. (strain STRAWB1)STRAW00609  UniProtKB/TrEMBL Q79ZR7  Putative 3-oxoacyl-ACP synthase III
[B] Streptomyces coelicolorSTRCO03224  UniProtKB/Swiss-Prot FABH2_STRCO  SCE29.15c, fabH4, probable 3-oxoacyl-[acyl carrier protein] synthase III, len: aa; similar to many eg. SW:FABH_ECOLI 3-oxoacyl-[acyl carrier protein] synthase III, FabH, from Escherichia coli (317 aa) fasta scores; opt: 765, z-score: 862.6, E(): 0, (40.8% identity in 314 aa overlap). Also similar to two from Streptomyces coelicolor - TR:O54151 (EMBL:AL021409) (335 aa) fasta scores; opt: 694, z-score: 782.9, E(): 0, (53.5% identity in 331 aa overlap) and TR:E1359140 (EMBL:AL034443) (316 aa) fasta scores; opt: 685, z-score: 773.2, E(): 0, (40.6% identity in 313 aa overlap). putative 3-oxoacyl-[acyl carrier protein] synthase III
[B] Lactobacillus brevis (strain ATCC 367 / JCM 1170)LACBA00884  UniProtKB/Swiss-Prot FABH_LACBA  3-oxoacyl-(acyl-carrier-protein) synthase III
[B] Lactobacillus helveticus (strain DPC 4571)LACH401460  UniProtKB/Swiss-Prot FABH_LACH4  Acyl-carier protein
[B] Lactobacillus plantarumLACPL01395  UniProtKB/Swiss-Prot FABH2_LACPL  3-oxoacyl-[acyl-carrier protein] synthase III
[B] Lactobacillus reuteri (strain DSM 20016)LACRD00946  UniProtKB/Swiss-Prot FABH_LACRD  3-oxoacyl-[acyl-carrier-protein] synthase III
[B] Lactobacillus reuteri (strain JCM 1112)LACRJ00905  UniProtKB/Swiss-Prot FABH_LACRJ  3-oxoacyl-[acyl-carrier-protein] synthase III
[B] Lactobacillus salivarius subsp. salivarius (strain UCC118)LACS100434  UniProtKB/TrEMBL Q1WUS4  3-oxoacyl-[acyl-carrier-protein] synthase III COG0332 [I] 3-oxoacyl-[acyl-carrier-protein] synthase III
[B] Lactococcus lactis subsp. lactisLACLA00750  UniProtKB/Swiss-Prot FABH_LACLA  3-oxoacyl-[acyl-carrier-protein] synthase 3
[B] Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288)STRGC01653  UniProtKB/Swiss-Prot FABH_STRGC  3-oxoacyl-[acyl-carrier-protein] synthase III
[B] Streptococcus pyogenes serotype M1STRP101877  UniProtKB/Swiss-Prot FABH_STRP1  3-oxoacyl-[acyl-carrier-protein] synthase 3
[B] Streptococcus pyogenes serotype M5 (strain Manfredo)STRPG00347  UniProtKB/Swiss-Prot FABH_STRPG  3-oxoacyl-[acyl-carrier-protein] synthase III
[B] Streptococcus sanguinis (strain SK36)STRSV01843  UniProtKB/Swiss-Prot FABH_STRSV  3-oxoacyl-[acyl-carrier-protein] synthase III, putative