| [A] Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) | METS300174 | A5UJK3 | Ribonuclease III (DsRNA-specific), Rnc |
| [A] Methanococcus maripaludis | METMP01526 | Q6LX27 | Ribonuclease III family:Double-stranded RNA binding (DsRBD) domain |
| [A] Methanococcus maripaludis (strain C5 / ATCC BAA-1333) | METM500049 | A4FVZ8 | Ribonuclease III |
| [A] Methanococcus maripaludis (strain C6 / ATCC BAA-1332) | METM601130 | A9A9D4 | Ribonuclease III |
| [A] Methanococcus maripaludis (strain C7 / ATCC BAA-1331) | METM700767 | A6VHB5 | Ribonuclease III |
| [A] Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) | METVS00827 | A6UQH3 | Ribonuclease III |
| [B] Solibacter usitatus (strain Ellin6076) | SOLUE01765 | RNC_SOLUE | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: aba:Acid345_3854 ribonuclease III |
| [B] Corynebacterium diphtheriae | CORDI01498 | RNC_CORDI | Similar to Mycobacterium tuberculosis ribonuclease III Rnc or Rv2925c or MT2995 or MTCY338.14c SW:RNC_MYCTU (Q10962) (240 aa) fasta scores: E(): 8.3e-42, 55.26% id in 228 aa, and to Escherichia coli ribonuclease III Rnc or B2567 or Z3848 or ECS3433 SW:RNC_ECOLI (P05797) (226 aa) fasta scores: E(): 9.9e-24, 40.95% id in 210 aa ribonuclease III |
| [B] Corynebacterium efficiens | COREF01924 | NP_738586.1 | similar to AL034447-16|CAA22415.1| percent identity: 48 in 224 aa putative ribonuclease III |
| [B] Corynebacterium glutamicum | CORGL02580 | RNC_CORGL | Ribonuclease 3 |
| [B] Corynebacterium glutamicum (strain R) | CORGB01993 | A4QFE0 | Hypothetical protein |
| [B] Corynebacterium jeikeium (strain K411) | CORJK01157 | RNC_CORJK | Ribonuclease III (EC 3.1.26.3) (RNase III).,Digests double-stranded RNA. Involved in the processing of ribosomal RNA precursors and of some mRNAS (By similarity). ribonuclease III |
| [B] Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) | CORU700781 | B1VG59 | Ribonuclease III |
| [B] Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) | MYCA903227 | B1MDL3 | Ribonuclease III Rnc |
| [B] Mycobacterium avium (strain 104) | MYCA103571 | A0QJ67 | ribonuclease III identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Mycobacterium paratuberculosis | MYCPA02965 | RNC_MYCPA | Rnc |
| [B] Mycobacterium leprae | MYCLE01652 | RNC_MYCLE | Highly similar to many ribonucleases involved in the digestion of double stranded RNA e.g. Escherichia coli SW:RNC_ECOLI (P05797) (226 aa); Fasta score E(): 1e-24, 41.8% identity in 213 aa overlap and Mycobacterium tuberculosis RV2925C SW:RNC_MYCTU (Q10962) (240 aa); Fasta score E(): 0, 86.8% identity in 235 aa overlap. Contains Pfam match to entry PF00035 dsrm, Double-stranded RNA binding motif. Contains Pfam match to entry PF00636 Ribonuclease_3, RNase3 domain.. Contains PS00517 Ribonuclease III family signature. RNAse III |
| [B] Mycobacterium leprae (strain Br4923) | MYCLB01643 | B8ZRZ3 | RNAse III |
| [B] Mycobacterium marinum (strain ATCC BAA-535 / M) | MYCMM01742 | B2HJJ5 | Ribonuclease III Rnc |
| [B] Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) | MYCS202248 | A0QV20 | Ribonuclease III |
| [B] Mycobacterium sp. (strain JLS) | MYCSJ01887 | A3PXU0 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: mmc:Mmcs_1949 ribonuclease III |
| [B] Mycobacterium sp. (strain KMS) | MYCSK01929 | A1UED6 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: mmc:Mmcs_1949 ribonuclease III |
| [B] Mycobacterium sp. (strain MCS) | MYCSS01917 | Q1BAM6 | Ribonuclease III |
| [B] Mycobacterium bovis | MYCBO02941 | RNC_MYCBO | Mb2950c, rnc, len: 240 aa. Equivalent to Rv2925c, len: 240 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 240 aa overlap). Probable rnc, ribonuclease III (RNase III) (EC 3.1.26.3), equivalent to O69469|RNC_MYCLE RIBONUCLEASE III from Mycobacterium leprae (238 aa). Also highly similar to other ribonucleases III e.g. Q9ZBQ7|RNC_STRCO from Streptomyces coelicolor (272 aa), FASTA scores: opt: 889, E(): 5.4e-51, (62.2% identity in 225 aa overlap) (N-terminus longer 21 aa); P51833|RNC_BACSU from Bacillus subtilis (249 aa), FASTA scores: opt: 493, E(): 5e-25, (43.25% identity in 215 aa overlap); P05797|RNC_ECOLI|RNC|B2567|Z3848|ECS3433 from Escherichia coli strain O157:H7 and K12 (226 aa), FASTA scores: opt: 459, E(): 7.9e-23, (41.8% identity in 213 aa overlap); etc. Contains PS00517 Ribonuclease III family signature. PROBABLE RIBONUCLEASE III RNC (RNASE III) |
| [B] Mycobacterium bovis (strain BCG / Paris 1173P2) | MYCBP02921 | A1KMS0 | Probable ribonuclease III rnc |
| [B] Mycobacterium tuberculosis | MYCTU04052 | RNC_MYCTU | Ribonuclease 3 |
| [B] Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) | MYCTA02979 | A5U6T2 | Ribonuclease III |
| [B] Mycobacterium tuberculosis (strain F11) | MYCTF02857 | A5WRH8 | ribonuclease III rnc (RNase III) Mapped to H37Rv Rv2925c |
| [B] Mycobacterium ulcerans (strain Agy99) | MYCUA01662 | A0PQ48 | ribonuclease III Rnc cytoplasmic protein digests double-stranded RNA. involved in the processing of ribosomal RNA precursors and of some mRNAs [catalytic activity: endonucleolytic cleavage to 5'- phosphomonoester] |
| [B] Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) | MYCVP02082 | A1T736 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: mmc:Mmcs_1949 ribonuclease III |
| [B] Nocardia farcinica | NOCFA04188 | RNC_NOCFA | putative RNase III |
| [B] Rhodococcus erythropolis (strain PR4 / NBRC 100887) | RHOE402425 | C0ZXQ4 | Probable ribonuclease III |
| [B] Rhodococcus opacus (strain B4) | RHOOB06569 | C1B2Q4 | Ribonuclease III |
| [B] Rhodococcus sp. (strain RHA1) | RHOSR06430 | Q0S2E1 | Ribonuclease III |
| [B] Acidothermus cellulolyticus (strain ATCC 43068 / 11B) | ACIC101570 | A0LV86 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: sco:SCO5572 ribonuclease III |
| [B] Frankia alni (strain ACN14a) | FRAAA05670 | Q0RDN0 | Ribonuclease III (RNase III) Evidence 2b : Function of strongly homologous gene; PubMedId : 3903434; Product type e : enzyme |
| [B] Frankia sp. (strain CcI3) | FRASC03491 | Q2J6Y9 | Ribonuclease III |
| [B] Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) | KINRD01372 | A6W7S5 | Ribonuclease III |
| [B] Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) | CLAM301375 | A5CQP9 | Ribonuclease III |
| [B] Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) | CLAMS00718 | B0REL9 | Ribonuclease III |
| [B] Salinispora arenicola (strain CNS-205) | SALAI01146 | A8M660 | Ribonuclease III |
| [B] Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) | SALTO01270 | A4X4F7 | RNAse III |
| [B] Saccharopolyspora erythraea (strain NRRL 23338) | SACEN05868 | A4FMJ8 | Ribonuclease III |
| [B] Phytoplasma sp. (strain STRAWB1) | STRAW02664 | RNC_STRAW | Ribonuclease 3 |
| [B] Streptomyces coelicolor | STRCO05541 | RNC_STRCO | SC7A1.16, rnc, ribonuclease III, len: 272aa; similar to many eg. SW:RNC_ECOLI rnc, ribonuclease III from Escherichia coli (226 aa) fasta scores; opt: 492, z-score: 612.9, E(): 7.7e-27, (40.9% identity in 220 aa overlap). Contains PS00517 Ribonuclease III family signature, Pfam match to entry PF00636 Ribonuclease_3, RNase3 domain., score 147.60, E-value 2.2e-40 and Pfam match to entry PF00035 dsrm, Double-stranded RNA binding motif, score 47.10, E-value 4e-10. ribonuclease III |
| [B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) | STRGG01781 | B1VYY2 | Putative ribonuclease III |
| [B] Thermobifida fusca (strain YX) | THEFY00649 | RNC_THEFY | ribonuclease III, bacterial |
| [B] Symbiobacterium thermophilum | SYMTH01429 | RNC_SYMTH | ribonuclease III |
| [B] Aquifex aeolicus | AQUAE00658 | RNC_AQUAE | Ribonuclease 3 |
| [B] Hydrogenobaculum sp. (strain Y04AAS1) | HYDS000506 | RNC_HYDS0 | Ribonuclease III |
| [B] Sulfurihydrogenibium sp. (strain YO3AOP1) | SULSY01611 | B2V6U0 | Ribonuclease III |
| [B] Bacteroides fragilis | BACFR00218 | RNC_BACFR | similar to gp:AE016940_58 [Bacteroides thetaiotaomicron VPI-5482], percent identity 80 in 286 aa, BLASTP E(): e-126 ribonuclease III |
| [B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) | BACFN00175 | RNC_BACFN | Similar to Staphylococcus epidermidis RNAse III se0908 SWALL:Q8CPI1 (EMBL:AE016747) (245 aa) fasta scores: E(): 8.7e-17, 34.34% id in 230 aa, and to Bacteroides thetaiotaomicron ribonuclease III BT3357 SWALL:AAO78463 (EMBL:AE016940) (324 aa) fasta scores: E(): 4e-84, 80.76% id in 286 aa, and to Chlorobium tepidum ribonuclease III Rnc or CT2119 SWALL:RNC_CHLTE (SWALL:Q8KAN7) (272 aa) fasta scores: E(): 7.4e-20, 33.98% id in 256 aa putative ribonuclease III |
| [B] Salinibacter ruber (strain DSM 13855) | SALRD01299 | Q2S2W4 | ribonuclease III identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Parachlamydia sp. (strain UWE25) (subsp. Acanthamoeba sp.) | PARUW00274 | RNC_PARUW | similar to Ribonuclease III putative Ribonuclease III |
| [B] Chlorobium tepidum | CHLTE02086 | RNC_CHLTE | Ribonuclease 3 |
| [B] Chlorobium chlorochromatii (strain CaD3) | CHLCH01621 | RNC_CHLCH | Ribonuclease III |
| [B] Chlorobium phaeobacteroides (strain BS1) | CHLPB00158 | B3EKH3 | Ribonuclease III |
| [B] Chlorobium phaeobacteroides (strain DSM 266) | CHLPD02339 | A1BJA6 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: cte:CT2119 ribonuclease III |
| [B] Prosthecochloris vibrioformis (strain DSM 265) | PROVI00189 | A4SCK9 | RNAse III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: plt:Plut_0128 ribonuclease III |
| [B] Chloroherpeton thalassium (strain ATCC 35110 / GB-78) | CHLT301548 | B3QS76 | Ribonuclease III |
| [B] Pelodictyon luteolum (strain DSM 273) | PELLD00126 | RNC_PELLD | Ribonuclease III |
| [B] Prosthecochloris aestuarii (strain DSM 271 / SK 413) | PROA200164 | B4S3N5 | Ribonuclease III |
| [B] Chloroflexus aggregans (strain MD-66 / DSM 9485) | CHLAD01661 | RNC_CHLAD | Ribonuclease III |
| [B] Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) | CHLSY01193 | RNC_CHLSY | Ribonuclease III |
| [B] Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) | CHLAA01087 | RNC_CHLAA | Ribonuclease III |
| [B] Roseiflexus castenholzii (strain DSM 13941 / HLO8) | ROSCS00372 | RNC_ROSCS | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: rrs:RoseRS_4602 ribonuclease III |
| [B] Roseiflexus sp. (strain RS-1) | ROSS104467 | RNC_ROSS1 | Ribonuclease III |
| [B] Dehalococcoides ethenogenes (strain 195) | DEHE100907 | RNC_DEHE1 | identified by similarity to SP:P51833; match to protein family HMM PF00035 ribonuclease III |
| [B] Dehalococcoides sp. (strain BAV1) | DEHSB00884 | A5FQN9 | Ribonuclease III |
| [B] Dehalococcoides sp. (strain CBDB1) | DEHSC00832 | RNC_DEHSC | ribonuclease III |
| [B] Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) | HERA201571 | A9B5J8 | Ribonuclease III |
| [B] Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) | THERP01322 | B9L2H4 | Ribonuclease III |
| [B] Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) | SYNP202498 | B1XKP4 | Ribonuclease III |
| [B] Synechocystis sp. (strain PCC 6803) | SYNY301864 | RNC_SYNY3 | Ribonuclease 3 |
| [B] Anabaena variabilis (strain ATCC 29413 / PCC 7937) | ANAVT03016 | Q3M8J6 | Ribonuclease III |
| [B] Anabaena sp. (strain PCC 7120) | ANASP00277 | RNC_ANASP | Ribonuclease 3 |
| [B] Nostoc punctiforme (strain ATCC 29133 / PCC 73102) | NOSP701223 | B2IYF6 | Ribonuclease III |
| [B] Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) | DICT600776 | B5YDQ5 | Ribonuclease III |
| [B] Dictyoglomus turgidum (strain Z-1310 / DSM 6724) | DICTD00886 | B8E199 | Ribonuclease III |
| [B] Bacillus amyloliquefaciens (strain FZB42) | BACA201490 | RNC_BACA2 | Rnc |
| [B] Bacillus anthracis | BACAN03650 | RNC_BACAN | similar to GB:L11931, GB:L23928, SP:P34896, PID:438634, GB:L11931, GB:L23928, SP:P34896, and PID:438634; identified by sequence similarity; putative ribonuclease III |
| [B] Bacillus cereus (strain AH187) | BACC703687 | RNC_BACC7 | Ribonuclease 3 |
| [B] Bacillus cereus (strain ATCC 10987) | BACC103851 | RNC_BACC1 | identified by match to protein family HMM PF00035; match to protein family HMM PF00636 ribonuclease III |
| [B] Bacillus cereus (strain ATCC 14579 / DSM 31) | BACCR03649 | RNC_BACCR | Ribonuclease III |
| [B] Bacillus cereus (strain G9842) | BACC203848 | RNC_BACC2 | Ribonuclease 3 |
| [B] Bacillus cereus (strain ZK) | BACCZ03571 | RNC_BACCZ | ribonuclease III |
| [B] Bacillus cereus subsp. cytotoxis (strain NVH 391-98) | BACCN02357 | RNC_BACCN | Ribonuclease III |
| [B] Bacillus clausii (strain KSM-K16) | BACSK02287 | RNC_BACSK | ribonuclease III |
| [B] Bacillus halodurans | BACHD02446 | RNC_BACHD | ribonuclease III |
| [B] Bacillus pumilus (strain SAFR-032) | BACP201472 | A8FD58 | Ribonuclease III |
| [B] Bacillus subtilis | BACSU01592 | RNC_BACSU | Ribonuclease III |
| [B] Bacillus thuringiensis (strain Al Hakam) | BACAH03289 | A0RHM2 | ribonuclease III |
| [B] Bacillus thuringiensis (subsp. konkukian) | BACHK03529 | RNC_BACHK | Structural feature(s) predicted by Psort:Uncleavable N-term signal seq: 3687583 - 3687568 ribonuclease III |
| [B] Bacillus weihenstephanensis (strain KBAB4) | BACWK03574 | RNC_BACWK | Ribonuclease III |
| [B] Geobacillus kaustophilus | GEOKA01181 | RNC_GEOKA | dsRNA-specific ribonuclease |
| [B] Geobacillus thermodenitrificans (strain NG80-2) | GEOTN01022 | RNC_GEOTN | Ribonuclease III |
| [B] Lysinibacillus sphaericus (strain C3-41) | LYSSC01476 | B1HQH5 | Ribonuclease 3 |
| [B] Oceanobacillus iheyensis | OCEIH01523 | RNC_OCEIH | CDS_ID OB1526 ribonuclease III |
| [B] Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) | EXIS201861 | B1YIN2 | Ribonuclease III |
| [B] Listeria innocua | LISIN01897 | RNC_LISIN | similar to ribonuclease III |
| [B] Listeria monocytogenes | LISMO01801 | RNC_LISMO | similar to ribonuclease III |
| [B] Listeria monocytogenes (serotype 4b / strain F2365) | LISMF01811 | RNC_LISMF | identified by similarity to SP:P51833; match to protein family HMM PF00035; match to protein family HMM PF00636 ribonuclease III |
| [B] Listeria monocytogenes serotype 4a (strain HCC23) | LISMH00740 | RNC_LISMH | Ribonuclease III |
| [B] Listeria monocytogenes serotype 4b (strain Clip81459) | LISMC01789 | RNC_LISMC | Putative ribonuclease III |
| [B] Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) | LISW601822 | RNC_LISW6 | RncS protein |
| [B] Macrococcus caseolyticus (strain JCSC5402) | MACCJ00819 | B9EBB3 | Ribonuclease III |
| [B] Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) | BREBN03562 | C0ZFP0 | Ribonuclease III |
| [B] Staphylococcus aureus (strain COL) | STAAC01217 | RNC_STAAC | identified by similarity to EGAD:37838; match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 ribonuclease III |
| [B] Staphylococcus aureus (strain JH1) | STAA201281 | RNC_STAA2 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: sao:SAOUHSC_01203 ribonuclease III, putative |
| [B] Staphylococcus aureus (strain JH9) | STAA901257 | RNC_STAA9 | RNAse III PFAM: ribonuclease III; double-stranded RNA binding domain protein |
| [B] Staphylococcus aureus (strain MRSA252) | STAAR01171 | RNC_STAAR | Similar to Bacillus subtilis ribonuclease III Rnc SW:RNC_BACSU (P51833) (249 aa) fasta scores: E(): 9.9e-45, 49.180% id in 244 aa, and to Lactococcus lactis ribonuclease III Rnc SW:RNC_LACLA (Q9CHD0) (231 aa) fasta scores: E(): 5.8e-36, 43.636% id in 220 aa putative ribonuclease III |
| [B] Staphylococcus aureus (strain MSSA476) | STAAS01172 | RNC_STAAS | Ortholog of S. aureus MRSA252 (BX571856) SAR1209 putative ribonuclease III |
| [B] Staphylococcus aureus (strain MW2) | STAAW01116 | RNC_STAAW | RNase III |
| [B] Staphylococcus aureus (strain Mu3 / ATCC 700698) | STAA101208 | RNC_STAA1 | RNase III |
| [B] Staphylococcus aureus (strain Mu50 / ATCC 700699) | STAAM01227 | RNC_STAAM | RNase III |
| [B] Staphylococcus aureus (strain N315) | STAAN01100 | RNC_STAAN | RNase III |
| [B] Staphylococcus aureus (strain NCTC 8325) | STAA801132 | RNC_STAA8 | ribonuclease III, putative |
| [B] Staphylococcus aureus (strain Newman) | STAAE01101 | RNC_STAAE | Ribonuclease III |
| [B] Staphylococcus aureus (strain USA300 / TCH1516) | STAAT01139 | RNC_STAAT | ribonuclease III |
| [B] Staphylococcus aureus (strain USA300) | STAA301099 | RNC_STAA3 | ribonuclease III identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Staphylococcus aureus (strain bovine RF122) | STAAB01091 | RNC_STAAB | Ribonuclease III |
| [B] Staphylococcus epidermidis (strain ATCC 12228) | STAES00889 | RNC_STAES | Ribonuclease III |
| [B] Staphylococcus epidermidis (strain ATCC 35984 / RP62A) | STAEQ00774 | RNC_STAEQ | identified by similarity to EGAD:37838; match to protein family HMM PF00035; match to protein family HMM PF00636 ribonuclease III |
| [B] Staphylococcus haemolyticus (strain JCSC1435) | STAHJ01635 | RNC_STAHJ | ribonuclease III |
| [B] Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) | STAS101534 | RNC_STAS1 | similar to gi|27467826|ref|NP_764463.1| [Staphylococcus epidermidis ATCC 12228], percent identity 84 in 244 aa, BLASTP E(): e-117 dsRNA-specific ribonuclease RNase III |
| [B] Alkaliphilus metalliredigens (strain QYMF) | ALKMQ02520 | A6TRT5 | Ribonuclease III |
| [B] Alkaliphilus oremlandii (strain OhILAs) | ALKOO01429 | A8MHB5 | Ribonuclease III |
| [B] Clostridium acetobutylicum | CLOAB01725 | RNC_CLOAB | DsRNA-specific ribonuclease III |
| [B] Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) | CLOB801156 | RNC_CLOB8 | Ribonuclease III |
| [B] Clostridium botulinum (strain ATCC 19397 / Type A) | CLOB102220 | A7FW19 | Ribonuclease III |
| [B] Clostridium botulinum (strain Alaska E43 / type E3) | CLOBA01118 | RNC_CLOBA | Ribonuclease III |
| [B] Clostridium botulinum (strain Eklund 17B / type B) | CLOBB01172 | RNC_CLOBB | Ribonuclease III |
| [B] Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) | CLOBH02449 | A5I4N2 | Putative ribonuclease III |
| [B] Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) | CLOBL02384 | A7GG43 | Ribonuclease III |
| [B] Clostridium botulinum (strain Loch Maree / Type A3) | CLOBM02431 | B1KWP4 | Ribonuclease III |
| [B] Clostridium botulinum (strain Okra / Type B1) | CLOBK02371 | B1II85 | Ribonuclease III |
| [B] Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) | CLOCE00669 | B8I7R0 | ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: cdf:CD1248 putative ribonuclease III |
| [B] Clostridium difficile (strain 630) | CLOD601249 | Q18BA7 | putative ribonuclease III |
| [B] Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) | CLOK501341 | RNC_CLOK5 | Putative uncharacterized protein |
| [B] Clostridium novyi (strain NT) | CLONN01307 | A0Q0Z0 | ribonuclease III identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Clostridium perfringens (strain ATCC 13124 / NCTC 8237) | CLOP101928 | Q0TPN5 | ribonuclease III identified by similarity to SP:P51833; match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Clostridium perfringens (strain SM101) | CLOPS01643 | Q0SSA2 | ribonuclease III identified by similarity to SP:P51833; match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) | CLOPH02405 | A9KLR1 | Ribonuclease III |
| [B] Clostridium tetani | CLOTE01077 | RNC_CLOTE | ribonuclease III |
| [B] Clostridium thermocellum (strain ATCC 27405 / DSM 1237) | CLOTH00894 | A3DDY6 | Ribonuclease III |
| [B] Finegoldia magna (strain ATCC 29328) | FINM200848 | B0S1M6 | Ribonuclease III |
| [B] Desulforudis audaxviator (strain MP104C) | DESAP00597 | B1I2D9 | Ribonuclease III |
| [B] Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) | CARHZ01391 | RNC_CARHZ | identified by similarity to SP:P51833; match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 ribonuclease III |
| [B] Desulfotomaculum reducens (strain MI-1) | DESRM01981 | RNC_DESRM | Ribonuclease III |
| [B] Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) | PELTS01719 | RNC_PELTS | DsRNA-specific ribonuclease |
| [B] Syntrophomonas wolfei subsp. wolfei (strain Goettingen) | SYNWW00720 | RNC_SYNWW | Ribonuclease III |
| [B] Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) | HALOH01009 | B8CWW9 | Ribonuclease III |
| [B] Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) | NATTJ01320 | RNC_NATTJ | Ribonuclease III |
| [B] Moorella thermoacetica (strain ATCC 39073) | MOOTA00912 | RNC_MOOTA | Ribonuclease III |
| [B] Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) | THEP301226 | B0K9X5 | Ribonuclease III |
| [B] Thermoanaerobacter sp. (strain X514) | THEPX01658 | B0K1V8 | Ribonuclease III |
| [B] Thermoanaerobacter tengcongensis | THETN01341 | RNC_THETN | Best Blastp hit = gi|10175109|dbj|BAB06208.1| (AP001515) ribonuclease III [Bacillus halodurans], score 193, E-value 1.00E-48 dsRNA-specific ribonuclease |
| [B] Enterococcus faecalis | ENTFA02878 | RNC_ENTFA | Ribonuclease 3 |
| [B] Lactobacillus acidophilus | LACAC01218 | RNC_LACAC | COG0571 dsRNA-specific ribonuclease dsRNA-specific ribonuclease RNaseIII |
| [B] Lactobacillus brevis (strain ATCC 367 / JCM 1170) | LACBA00900 | Q03RT6 | dsRNA-specific ribonuclease |
| [B] Lactobacillus casei (strain ATCC 334) | LACC301468 | Q038J1 | dsRNA-specific ribonuclease |
| [B] Lactobacillus casei (strain BL23) | LACCB01735 | B3WEV0 | Ribonuclease 3 |
| [B] Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) | LACDA01276 | Q1G9K7 | Ribonuclease III |
| [B] Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) | LACDB01073 | Q049R1 | dsRNA-specific ribonuclease |
| [B] Lactobacillus fermentum (strain IFO 3956 / LMG 18251) | LACF301219 | RNC_LACF3 | Ribonuclease III |
| [B] Lactobacillus helveticus (strain DPC 4571) | LACH401067 | A8YVU3 | Double stranded RNA-specific ribonuclease RNase |
| [B] Lactobacillus plantarum | LACPL01363 | RNC_LACPL | ribonuclease III |
| [B] Lactobacillus reuteri (strain DSM 20016) | LACRD01107 | RNC_LACRD | Ribonuclease 3 |
| [B] Lactobacillus reuteri (strain JCM 1112) | LACRJ01067 | RNC_LACRJ | ribonuclease III |
| [B] Lactobacillus sakei subsp. sakei (strain 23K) | LACSS00700 | RNC_LACSS | Ribonuclease (RNase III) |
| [B] Lactobacillus salivarius subsp. salivarius (strain UCC118) | LACS100606 | RNC_LACS1 | Ribonuclease III COG0571 [K] dsRNA-specific ribonuclease |
| [B] Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) | PEDPA00791 | RNC_PEDPA | dsRNA-specific ribonuclease |
| [B] Lactococcus lactis subsp. cremoris (strain MG1363) | LACLM01657 | RNC_LACLM | Ribonuclease III |
| [B] Lactococcus lactis subsp. cremoris (strain SK11) | LACLS00750 | RNC_LACLS | dsRNA-specific ribonuclease |
| [B] Lactococcus lactis subsp. lactis | LACLA00781 | RNC_LACLA | Ribonuclease 3 |
| [B] Streptococcus agalactiae (serotype III) | STRA300694 | RNC_STRA3 | Similar to ribonuclease III Unknown |
| [B] Streptococcus agalactiae (serotype V) | STRA500699 | NP_687738.1 | identified by match to PFAM protein family HMM PF00035 ribonuclease III |
| [B] Streptococcus agalactiae serotype Ia | STRA100736 | RNC_STRA1 | identified by similarity to SP:P51833; match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 ribonuclease III |
| [B] Streptococcus equi subsp. equi (strain 4047) | STRE401418 | RNC_STRE4 | ribonuclease III |
| [B] Streptococcus equi subsp. zooepidemicus (strain H70) | STRS700580 | RNC_STRS7 | ribonuclease III Ortholog of S. equi 4047 (FM204883) SEQ1567 |
| [B] Streptococcus equi subsp. zooepidemicus (strain MGCS10565) | STREM01319 | B4U410 | Ribonuclease III Rnc |
| [B] Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) | STRGC00760 | RNC_STRGC | Ribonuclease III |
| [B] Streptococcus mutans | STRMU01361 | RNC_STRMU | Best Blastp Hit: sp|P51833|RNC_BACSU RIBONUCLEASE III (RNASE III) >gi|7435219|pir||B69693 ribonuclease III (EC 3.1.26.3) - Bacillus subtilis >gi|2633965|emb|CAB13466.1| (Z99112) ribonuclease III [Bacillus subtilis] putative ribonuclease III |
| [B] Streptococcus pneumoniae | STRPN01152 | RNC_STRPN | ribonuclease III |
| [B] Streptococcus pneumoniae (strain ATCC BAA-255 / R6) | STRR601120 | RNC_STRR6 | Ribonuclease III |
| [B] Streptococcus pneumoniae (strain CGSP14) | STRPS01040 | RNC_STRPS | Ribonuclease III |
| [B] Streptococcus pneumoniae (strain Hungary19A-6) | STRPI01240 | RNC_STRPI | Ribonuclease III |
| [B] Streptococcus pneumoniae (strain JJA) | STRZJ01096 | RNC_STRZJ | Ribonuclease III |
| [B] Streptococcus pneumoniae (strain P1031) | STRZP01173 | RNC_STRZP | Ribonuclease III |
| [B] Streptococcus pneumoniae serotype 19F (strain G54) | STRP401115 | RNC_STRP4 | Ribonuclease III |
| [B] Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) | STRP201040 | RNC_STRP2 | ribonuclease III equivalent gene in S.pneumoniae TIGR4 = SP1248; equivalent gene in S.pneumoniae R6 = spr1127; identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Streptococcus pyogenes (serotype M18) | STRP800452 | RNC_STRP8 | best blastp match gb|AAK33526.1| (AE006510) putative ribonuclease III [Streptococcus pyogenes M1 GAS] putative ribonuclease III |
| [B] Streptococcus pyogenes (serotype M3) | STRP300374 | RNC_STRP3 | best non-GAS blastp hit: gb|AAK99930.1| (AE008485) Ribonuclease III [Streptococcus pneumoniae R6] putative ribonuclease III |
| [B] Streptococcus pyogenes (serotype M6) | STRP600469 | RNC_STRP6 | Ribonuclease III |
| [B] Streptococcus pyogenes serotype M1 | STRP100931 | RNC_STRP1 | Ribonuclease 3 |
| [B] Streptococcus pyogenes serotype M12 (strain MGAS2096) | STRPB00452 | RNC_STRPB | Ribonuclease III |
| [B] Streptococcus pyogenes serotype M12 (strain MGAS9429) | STRPC00431 | RNC_STRPC | ribonuclease III |
| [B] Streptococcus pyogenes serotype M2 (strain MGAS10270) | STRPD00434 | RNC_STRPD | Ribonuclease III |
| [B] Streptococcus pyogenes serotype M28 | STRPM00421 | RNC_STRPM | ribonuclease III |
| [B] Streptococcus pyogenes serotype M4 (strain MGAS10750) | STRPF00450 | RNC_STRPF | Ribonuclease III |
| [B] Streptococcus pyogenes serotype M49 (strain NZ131) | STRPZ00415 | RNC_STRPZ | Ribonuclease III |
| [B] Streptococcus pyogenes serotype M5 (strain Manfredo) | STRPG01393 | RNC_STRPG | Ribonuclease III |
| [B] Streptococcus sanguinis (strain SK36) | STRSV01479 | RNC_STRSV | Ribonuclease III, putative |
| [B] Streptococcus suis (strain 05ZYH33) | STRSY01177 | A4VVL8 | DsRNA-specific ribonuclease |
| [B] Streptococcus suis (strain 98HAH33) | STRS201196 | A4W1X7 | DsRNA-specific ribonuclease |
| [B] Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) | STRT201186 | RNC_STRT2 | ribonuclease III |
| [B] Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) | STRTD01050 | RNC_STRTD | dsRNA-specific ribonuclease |
| [B] Streptococcus thermophilus (strain CNRZ 1066) | STRT101212 | RNC_STRT1 | ribonuclease III |
| [B] Fusobacterium nucleatum subsp. nucleatum | FUSNN00726 | RNC_FUSNN | Ribonuclease 3 |
| [B] Rhodopirellula baltica | RHOBA02716 | NP_866401.1 | PMID: 86039802 PMID: 97439408 best DB hits: BLAST: swissprot:Q9ZLH2; RNC_HELPJ RIBONUCLEASE III (RNASE III) -----; E=3e-26 pir:F64602; ribonuclease III - Helicobacter pylori (strain 26695); E=3e-26 swissprot:P56118; RNC_HELPY RIBONUCLEASE III (RNASE III); E=3e-26 COG: jhp0607; COG0571 dsRNA-specific ribonuclease; E=3e-27 PFAM: PF00636; RNase3 domain.; E=1.2e-26 PF00035; Double-stranded RNA binding mo; E=3.9e-21 ribonuclease III |
| [B] Phenylobacterium zucineum (strain HLK1) | PHEZH01861 | RNC_PHEZH | Ribonuclease III |
| [B] Bartonella bacilliformis (strain ATCC 35685 / KC583) | BARBK00448 | RNC_BARBK | Ribonuclease III |
| [B] Bartonella henselae | BARHE00495 | RNC_BARHE | Ribonuclease III |
| [B] Bartonella quintana | BARQU00419 | RNC_BARQU | Ribonuclease III |
| [B] Bartonella tribocorum (strain CIP 105476 / IBS 506) | BART100651 | RNC_BART1 | ribonuclease III Ribonuclease III (EC 3.1.26.3) (RNase III),InterPro; Ribonuclease III family hypothetical protein |
| [B] Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) | BEII902384 | B2II96 | Ribonuclease III |
| [B] Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) | METSB00974 | RNC_METSB | Ribonuclease III |
| [B] Bradyrhizobium japonicum | BRAJA05005 | RNC_BRAJA | Ribonuclease 3 |
| [B] Nitrobacter hamburgensis (strain X14 / DSM 10229) | NITHX02114 | Q1QL54 | Ribonuclease III |
| [B] Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) | NITWN01821 | RNC_NITWN | ribonuclease III |
| [B] Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) | OLICO01814 | B6JGG1 | Ribonuclease III |
| [B] Rhodopseudomonas palustris | RHOPA02689 | RNC_RHOPA | observed by proteomics Citation: Proteomics from VerBerkmoes et al. (2003) unpublished putative ribonuclease III |
| [B] Rhodopseudomonas palustris (strain BisA53) | RHOP502978 | Q07M75 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: rpc:RPC_2640 ribonuclease III |
| [B] Rhodopseudomonas palustris (strain BisB18) | RHOPB02598 | Q214J6 | Ribonuclease III |
| [B] Rhodopseudomonas palustris (strain BisB5) | RHOPS02634 | Q136V9 | Ribonuclease III |
| [B] Rhodopseudomonas palustris (strain HaA2) | RHOP202601 | Q2IWU5 | Ribonuclease III |
| [B] Rhodopseudomonas palustris (strain TIE-1) | RHOPT02915 | B3QJH4 | Ribonuclease III |
| [B] Brucella abortus | BRUAB00629 | RNC_BRUAB | similar to BR0661, ribonuclease III ribonuclease III |
| [B] Brucella abortus (strain 2308) | BRUA200675 | RNC_BRUA2 | Ribonuclease III family:Double-stranded RNA binding (DsRBD) domain |
| [B] Brucella abortus (strain S19) | BRUA100603 | RNC_BRUA1 | Ribonuclease III family |
| [B] Brucella canis (strain ATCC 23365 / NCTC 10854) | BRUC200634 | RNC_BRUC2 | Ribonuclease III |
| [B] Brucella melitensis | BRUME01277 | RNC_BRUME | Ribonuclease 3 |
| [B] Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) | BRUO200583 | A5VPJ8 | Ribonuclease III |
| [B] Brucella suis | BRUSU00630 | RNC_BRUSU | identified by match to PFAM protein family HMM PF00035 ribonuclease III |
| [B] Brucella suis (strain ATCC 23445 / NCTC 10510) | BRUSI00648 | RNC_BRUSI | ribonuclease III GO_function: ribonuclease III activity [GO ID 0004525]; GO_process: RNA processing [GO ID 0006396] |
| [B] Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) | OCHA402595 | A6X286 | Ribonuclease III |
| [B] Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) | METC402409 | B7L2A6 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: mex:Mext_2274 ribonuclease III |
| [B] Methylobacterium extorquens (strain PA1) | METEP02234 | A9W513 | Ribonuclease III |
| [B] Methylobacterium nodulans (strain ORS2060 / LMG 21967) | METNO06895 | B8IMY4 | Ribonuclease III |
| [B] Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) | METPB02187 | B1Z874 | Ribonuclease III |
| [B] Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) | METRJ03390 | B1LTR3 | Ribonuclease III |
| [B] Methylobacterium sp. (strain 4-46) | METS406236 | B0UE18 | Ribonuclease III |
| [B] Mesorhizobium sp. (strain BNC1) | MESSB00942 | Q11JS8 | ribonuclease III PFAM: ribonuclease III double-stranded RNA binding KEGG: mlo:mlr7765 ribonuclease III |
| [B] Rhizobium loti | RHILO06091 | RNC_RHILO | ribonuclease III |
| [B] Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) | PARL102801 | A7HX48 | Ribonuclease III |
| [B] Rhizobium etli (strain CFN 42 / ATCC 51251) | RHIEC01356 | RNC_RHIEC | ribonuclease III protein similar to rnc (Atu1035) [Agrobacterium tumefaciens str. C58] and rnc (SMc02652) [Sinorhizobium meliloti] Similar to entrez-protein:Q8UGK2 Putative location:bacterial cytoplasm Psort-Score: 0.2412; go_component: intracellular [goid 0005622]; go_function: hydrolase activity [goid 0016787]; go_function: endonuclease activity [goid 0004519]; go_function: RNA binding [goid 0003723]; go_function: nuclease activity [goid 0004518]; go_function: double-stranded RNA binding [goid 0003725]; go_function: ribonuclease III activity [goid 0004525]; go_process: RNA processing [goid 0006396]; go_process: rRNA processing [goid 0006364]; go_process: mRNA processing [goid 0006397] |
| [B] Rhizobium etli (strain CIAT 652) | RHIE601438 | RNC_RHIE6 | Ribonuclease III protein |
| [B] Rhizobium leguminosarum bv. trifolii (strain WSM2304) | RHILW00985 | RNC_RHILW | Ribonuclease 3 |
| [B] Rhizobium leguminosarum bv. viciae (strain 3841) | RHIL301516 | RNC_RHIL3 | putative ribonuclease III similarity:fasta; with=UniProt:RNC_RHOCA (EMBL:RCLEPRNCG); Rhodobacter capsulatus (Rhodopseudomonas capsulata).; rnc; Ribonuclease III (EC 3.1.26.3) (RNase III).; length=228; id 45.455; 220 aa overlap; query 9-228; subject 4-223 similarity:fasta; with=UniProt:RNC_AGRT5 (EMBL:AE008033); Agrobacterium tumefaciens (strain C58/ATCC 33970).; rnc; Ribonuclease III (EC 3.1.26.3) (RNase III).; length=239; id 74.477; 239 aa overlap; query 1-239; subject 1-239 |
| [B] Rhizobium meliloti | RHIME01059 | RNC_RHIME | Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE RIBONUCLEASE III PROTEIN |
| [B] Sinorhizobium medicae (strain WSM419) | SINMW00676 | RNC_SINMW | Ribonuclease III |
| [B] Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) | AZOC501997 | RNC_AZOC5 | Ribonuclease III |
| [B] Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) | XANP203784 | A7IM62 | Ribonuclease III |
| [B] Hyphomonas neptunium (strain ATCC 15444) | HYPNA00869 | Q0C3T9 | Ribonuclease III |
| [B] Maricaulis maris (strain MCS10) | MARMM01566 | Q0APC4 | Ribonuclease III |
| [B] Dinoroseobacter shibae (strain DFL 12) | DINSH00200 | RNC_DINSH | Ribonuclease III |
| [B] Jannaschia sp. (strain CCS1) | JANSC00521 | RNC_JANSC | Ribonuclease III |
| [B] Paracoccus denitrificans (strain Pd 1222) | PARDP00401 | A1AZ39 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: rsp:RSP_1675 ribonuclease III |
| [B] Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) | RHOS400254 | RNC_RHOS4 | COG0571, Rnc, dsRNA-specific ribonuclease. smart00535, RIBOc, Ribonuclease III family. pfam00636, Ribonuclease_3, RNase3 domain. cd00048, DSRM, Double-stranded RNA binding motif. pfam00035, dsrm, Double-stranded RNA binding motif. smart00358, DSRM, Double Experimental evidence in R.capsulatus. Cleaves 23S rRNA. Citation: Nucleic Acids Res. 1996 Apr 1;24(7):1246-51. J Bacteriol. 2000 Sep;182(17):4719-29. Ribonuclease III |
| [B] Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) | RHOS502454 | RNC_RHOS5 | Ribonuclease III |
| [B] Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) | RHOS100304 | RNC_RHOS1 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: rsp:RSP_1675 ribonuclease III |
| [B] Rhodobacter sphaeroides (strain KD131 / KCTC 12085) | RHOSK03052 | RNC_RHOSK | Ribonuclease 3 |
| [B] Roseobacter denitrificans (strain ATCC 33942 / OCh 114) | ROSDO01266 | RNC_ROSDO | ribonuclease III |
| [B] Acidiphilium cryptum (strain JF-5) | ACICJ00248 | A5FV46 | Ribonuclease III |
| [B] Granulobacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) | GRABC00992 | Q0BTG2 | Ribonuclease III |
| [B] Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) | MAGMM02233 | BAE51062.1 | dsRNA-specific ribonuclease |
| [B] Rhodospirillum centenum (strain ATCC 51521 / SW) | RHOCS01442 | B6IN01 | Ribonuclease III |
| [B] Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) | RHORT01845 | Q2RT93 | Ribonuclease III |
| [B] Anaplasma marginale (strain St. Maries) | ANAMM00736 | RNC_ANAMM | COG0571 Rnc dsRNA-specific ribonuclease; go_process: 0006396 ribonuclease III |
| [B] Ehrlichia canis (strain Jake) | EHRCJ00823 | RNC_EHRCJ | Ribonuclease III |
| [B] Ehrlichia chaffeensis (strain Arkansas) | EHRCR00996 | RNC_EHRCR | ribonuclease III identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Ehrlichia ruminantium (strain Gardel) | EHRRG00844 | RNC_EHRRG | Similar to sp|Q92JB0|RNC_RICCN sp|Q9ZE31|RNC_RICPR; Ortholog to ERWE_CDS_08540 Ribonuclease III |
| [B] Ehrlichia ruminantium (strain Welgevonden) | EHRRW00854 | RNC_EHRRW | Similar to sp|Q92JB0|RNC_RICCN sp|Q9ZE31|RNC_RICPR; Ortholog to ERGA_CDS_08450 Ribonuclease III |
| [B] Neorickettsia sennetsu (strain Miyayama) | NEOSM00877 | Q2GCL4 | ribonuclease III identified by similarity to SP:P05797; match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Orientia tsutsugamushi (strain Boryong) | ORITB01371 | A5CEW8 | Ribonuclease III |
| [B] Orientia tsutsugamushi (strain Ikeda) | ORITI01609 | B3CVL2 | Ribonuclease III |
| [B] Rickettsia akari (strain Hartford) | RICAH00167 | RNC_RICAH | Ribonuclease III |
| [B] Rickettsia bellii (strain OSU 85-389) | RICB800244 | RNC_RICB8 | Ribonuclease III |
| [B] Rickettsia bellii (strain RML369-C) | RICBR01153 | RNC_RICBR | Ribonuclease III |
| [B] Rickettsia canadensis (strain McKiel) | RICCK00113 | RNC_RICCK | Ribonuclease III |
| [B] Rickettsia felis | RICFE01137 | RNC_RICFE | Ribonuclease III |
| [B] Rickettsia massiliae (strain Mtu5) | RICM500109 | RNC_RICM5 | Ribonuclease III |
| [B] Rickettsia prowazekii | RICPR00113 | RNC_RICPR | RIBONUCLEASE III (rnc) |
| [B] Rickettsia rickettsii (strain Iowa) | RICRO00178 | RNC_RICRO | ribonuclease III |
| [B] Rickettsia rickettsii (strain Sheila Smith) | RICRS00167 | RNC_RICRS | Ribonuclease III |
| [B] Rickettsia typhi | RICTY00017 | RNC_RICTY | ribonuclease III |
| [B] Rickettsia conorii | RICCN00157 | RNC_RICCN | Ribonuclease 3 |
| [B] Wolbachia pipientis subsp. Culex pipiens (strain wPip) | WOLPP00956 | RNC_WOLPP | Ribonuclease III |
| [B] Wolbachia pipientis wMel | WOLPM01081 | RNC_WOLPM | Identified by similarity to EGAD:41192; match to PF00636 protein family HMM PF00636; match to PF00035 protein family HMM PF00035 ribonuclease III, putative |
| [B] Wolbachia sp. (subsp. Brugia malayi) (strain TRS) | WOLTR00099 | RNC_WOLTR | dsRNA-specific ribonuclease |
| [B] Wolbachia sp. subsp. Drosophila simulans (strain wRi) | WOLWR00913 | RNC_WOLWR | Ribonuclease III, putative |
| [B] Pelagibacter ubique | PELUB01034 | RNC_PELUB | ribonuclease III |
| [B] Erythrobacter litoralis (strain HTCC2594) | ERYLH00962 | Q2NB81 | ribonuclease III COG0571 dsRNA-specific ribonuclease |
| [B] Novosphingobium aromaticivorans (strain DSM 12444) | NOVAD01790 | Q2G7C6 | Ribonuclease III |
| [B] Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) | SPHWW00207 | A5V2R4 | RNAse III |
| [B] Sphingopyxis alaskensis | SPHAL01198 | RNC_SPHAL | Ribonuclease III |
| [B] Zymomonas mobilis | ZYMMO01367 | RNC_ZYMMO | RNase III; COG0571 ribonuclease III |
| [B] Bordetella avium (strain 197N) | BORA101116 | RNC_BORA1 | ribonuclease III |
| [B] Bordetella bronchiseptica | BORBR03705 | RNC_BORBR | ortholog of Bordetella pertussis (BX470248) BP2431 ribonuclease III |
| [B] Bordetella parapertussis | BORPA03247 | RNC_BORPA | ortholog of Bordetella pertussis (BX470248) BP2431 ribonuclease III |
| [B] Bordetella pertussis | BORPE02219 | RNC_BORPE | Similar to Escherichia coli ribonuclease III Rnc or b2567 or z3848 or ecs3433 SW:RNC_ECOLI (P05797) (226 aa) fasta scores: E(): 7.5e-39, 50.22% id in 221 aa and to Vibrio cholerae ribonuclease III Rnc or Vc2461 TR:Q9KPB2 (EMBL:AE004316) (225 aa) fasta scores: E(): 7.4e-39, 50.46% id in 216 aa ribonuclease III |
| [B] Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) | BORPD01715 | RNC_BORPD | Ribonuclease III |
| [B] Cupriavidus taiwanensis (strain R1 / LMG 19424) | CUPTR02004 | RNC_CUPTR | Ribonuclease III |
| [B] Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) | RALEH02482 | RNC_RALEH | dsRNA-specific ribonuclease |
| [B] Ralstonia eutropha (strain JMP134) | RALEJ02225 | RNC_RALEJ | Ribonuclease III, bacterial |
| [B] Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) | RALME02373 | RNC_RALME | Ribonuclease III |
| [B] Polynucleobacter necessarius (strain STIR1) | POLNS00359 | B1XTL4 | Ribonuclease III |
| [B] Polynucleobacter sp. (strain QLW-P1DMWA-1) | POLSQ00401 | A4SVW2 | Ribonuclease III |
| [B] Ralstonia pickettii (strain 12J) | RALPJ00906 | RNC_RALPJ | Ribonuclease III |
| [B] Ralstonia solanacearum | RALSO01059 | RNC_RALSO | Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE RIBONUCLEASE III (RNASE III) PROTEIN |
| [B] Acidovorax avenae subsp. citrulli (strain AAC00-1) | ACIAC01135 | A1TLF0 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: pol:Bpro_3635 ribonuclease III |
| [B] Acidovorax sp. (strain JS42) | ACISJ03035 | A1WAW5 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: pol:Bpro_3635 ribonuclease III |
| [B] Delftia acidovorans (strain DSM 14801 / SPH-1) | DELAS05169 | RNC_DELAS | Ribonuclease III |
| [B] Diaphorobacter sp. (strain TPSY) | DIAST02548 | B9MDP6 | Ribonuclease III |
| [B] Polaromonas naphthalenivorans (strain CJ2) | POLNA02993 | A1VRT2 | Ribonuclease III |
| [B] Polaromonas sp. (strain JS666 / ATCC BAA-500) | POLSJ03559 | Q126K3 | Ribonuclease III |
| [B] Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) | RHOFD01696 | RNC_RHOFD | Ribonuclease III |
| [B] Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) | LEPCP00595 | B1XZM7 | Ribonuclease III |
| [B] Methylibium petroleiphilum (strain PM1) | METPP00647 | A2SDH3 | Ribonuclease III |
| [B] Thiobacillus denitrificans (strain ATCC 25259) | THIDA02085 | RNC_THIDA | ribonuclease III |
| [B] Methylobacillus flagellatus (strain KT / ATTC 51484 / DSM 6875) | METFK00859 | Q1H2L2 | Ribonuclease III |
| [B] Chromobacterium violaceum | CHRVO02061 | RNC_CHRVO | identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0571 ribonuclease III |
| [B] Laribacter hongkongensis (strain HLHK9) | LARHH01429 | C1D7L4 | Rnc |
| [B] Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) | NEIG100236 | RNC_NEIG1 | Best Blastp Hit: pir||C81935 probable ribonuclease III (EC 3.1.26.3) NMA0888 [imported] - Neisseria meningitidis (group A strain Z2491) >gi|7379603|emb|CAB84168.1| (AL162754) putative ribonuclease III [Neisseria meningitidis] COG0571 dsRNA-specific ribonuclease; Rnc putative ribonuclease III |
| [B] Neisseria gonorrhoeae (strain NCCP11945) | NEIG200386 | RNC_NEIG2 | Ribonuclease III |
| [B] Neisseria meningitidis serogroup A | NEIMA00789 | RNC_NEIMA | Putative ribonuclease III |
| [B] Neisseria meningitidis serogroup B | NEIMB00644 | RNC_NEIMB | Ribonuclease 3 |
| [B] Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) | NEIMF00583 | A1KSU9 | Putative ribonuclease III |
| [B] Nitrosomonas europaea | NITEU02239 | RNC_NITEU | rnc; ribonuclease III (RNAse III) protein |
| [B] Nitrosomonas eutropha (strain C71) | NITEC01674 | RNC_NITEC | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: neu:NE2324 ribonuclease III (RNAse III) protein |
| [B] Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) | NITMU01679 | Q2Y871 | Ribonuclease III |
| [B] Azoarcus sp. (strain BH72) | AZOSB01638 | A1K604 | putative Ribonuclease III, Ribonuclease III Digests double-stranded rna. Involved in the processing of ribosomal rna precursors and of some mrnas. Catalysis of the endonucleolytic cleavage of RNA to 5'-phosphomonoesters 56% 1. SM00358; DSRM; 1. SM00535; RIBOc; 1 EC: 3.1.26.3 (RNase III). High confidence in function and specificity |
| [B] Azoarcus sp. (strain EbN1) | AZOSE03065 | RNC_AZOSE | ribonuclease III |
| [B] Dechloromonas aromatica (strain RCB) | DECAR01996 | RNC_DECAR | Ribonuclease III, bacterial |
| [B] Bdellovibrio bacteriovorus | BDEBA01770 | RNC_BDEBA | InterPro: Ribonuclease III family, hypothetical protein ribonuclease III |
| [B] Desulfococcus oleovorans (strain DSM 6200 / Hxd3) | DESOH01491 | A8ZZF3 | Ribonuclease III |
| [B] Desulfotalea psychrophila | DESPS01245 | RNC_DESPS | related to ribonuclease III |
| [B] Lawsonia intracellularis (strain PHE/MN1-00) | LAWIP00570 | Q1MQV2 | dsRNA-specific ribonuclease |
| [B] Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) | GEOBB03160 | B5E9M8 | Ribonuclease III |
| [B] Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) | GEOLS01894 | B3E2K4 | Ribonuclease III |
| [B] Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) | GEOMG02245 | RNC_GEOMG | Ribonuclease III:Double-stranded RNA binding |
| [B] Geobacter sulfurreducens | GEOSL02192 | RNC_GEOSL | Ribonuclease 3 |
| [B] Geobacter uraniumreducens (strain Rf4) | GEOUR03008 | A5G695 | Ribonuclease III |
| [B] Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) | PELCD01509 | RNC_PELCD | Ribonuclease 3 |
| [B] Pelobacter propionicus (strain DSM 2379) | PELPD01682 | A1APX0 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: gme:Gmet_2317 ribonuclease III:double-stranded RNA binding |
| [B] Myxococcus xanthus (strain DK 1622) | MYXXD03599 | RNC_MYXXD | ribonuclease III identified by similarity to SP:P51833; match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Sorangium cellulosum (strain So ce56) | SORC501699 | A9FII1 | Ribonuclease III |
| [B] Syntrophus aciditrophicus (strain SB) | SYNAS02268 | Q2LVR4 | ribonuclease III |
| [B] Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) | SYNFM00863 | RNC_SYNFM | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: sat:SYN_00796 ribonuclease III |
| [B] Arcobacter butzleri (strain RM4018) | ARCB401573 | RNC_ARCB4 | Ribonuclease III |
| [B] Campylobacter concisus (strain 13826) | CAMC100332 | RNC_CAMC1 | Ribonuclease III |
| [B] Campylobacter curvus (strain 525.92) | CAMC501921 | RNC_CAMC5 | Ribonuclease III |
| [B] Campylobacter fetus subsp. fetus (strain 82-40) | CAMFF01646 | RNC_CAMFF | ribonuclease III identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) | CAMHC01514 | A7I3P5 | Ribonuclease III |
| [B] Campylobacter jejuni | CAMJE01550 | RNC_CAMJE | Ribonuclease 3 |
| [B] Campylobacter jejuni (strain RM1221) | CAMJR01742 | RNC_CAMJR | identified by similarity to SP:P51833; match to protein family HMM PF00035; match to protein family HMM PF00636 ribonuclease III |
| [B] Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) | CAMJD01618 | RNC_CAMJD | Ribonuclease III |
| [B] Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) | CAMJJ01548 | A1W1N7 | ribonuclease III identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) | CAMJ801529 | RNC_CAMJ8 | Ribonuclease III |
| [B] Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) | CAMLR01431 | B9KE10 | Ribonuclease III |
| [B] Helicobacter acinonychis (strain Sheeba) | HELAH00742 | RNC_HELAH | ribonuclease III (RNase III) Ribonuclease III (EC 3.1.26.3) (RNase III) High confidence in function and specificity |
| [B] Helicobacter hepaticus | HELHP00698 | RNC_HELHP | ribonuclease III |
| [B] Helicobacter pylori | HELPY00652 | RNC_HELPY | similar to SP:P05797 GB:X02946 PID:42769 PID:499371 PID:987642 percent identity: 37.33; identified by sequence similarity; putative ribonuclease III (rnc) |
| [B] Helicobacter pylori (strain G27) | HELPG00606 | RNC_HELPG | Ribonuclease III |
| [B] Helicobacter pylori (strain HPAG1) | HELPH00647 | Q1CTK8 | ribonuclease III |
| [B] Helicobacter pylori (strain Shi470) | HELPS00676 | RNC_HELPS | Ribonuclease III |
| [B] Helicobacter pylori J99 | HELPJ00603 | RNC_HELPJ | Ribonuclease III |
| [B] Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) | SULDN02002 | Q30NY3 | RNAse III |
| [B] Wolinella succinogenes | WOLSU01716 | RNC_WOLSU | RIBONUCLEASE III |
| [B] Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) | NAUPA00093 | B9L7C7 | Ribonuclease III |
| [B] Nitratiruptor sp. (strain SB155-2) | NITSB00215 | RNC_NITSB | Ribonuclease III |
| [B] Sulfurovum sp. (strain NBC37-1) | SULNB02253 | RNC_SULNB | Ribonuclease III |
| [B] Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) | ACIF201299 | B7J9K1 | Ribonuclease III |
| [B] Acidithiobacillus ferrooxidans (strain ATCC 53993) | ACIF501069 | B5EQL3 | Ribonuclease III |
| [B] Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) | AERHH00770 | A0KGF2 | ribonuclease III identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Aeromonas salmonicida (strain A449) | AERS403147 | A4SRD2 | Ribonuclease III |
| [B] Alteromonas macleodii (strain DSM 17117 / Deep ecotype) | ALTMD02950 | B4RVA6 | Ribonuclease III |
| [B] Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) | MARAV02145 | A1U2V5 | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: hch:HCH_01800 ribonuclease III |
| [B] Colwellia psychrerythraea (strain 34H / ATCC BAA-681) | COLP303956 | RNC_COLP3 | identified by similarity to SP:P05797; match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 ribonuclease III |
| [B] Idiomarina loihiensis | IDILO00800 | RNC_IDILO | Rnase III, dsRNA-specific ribonuclease |
| [B] Pseudoalteromonas atlantica (strain T6c / BAA-1087) | PSEA603112 | Q15R33 | Ribonuclease III |
| [B] Pseudoalteromonas haloplanktis (strain TAC 125) | PSEHT00700 | CAI85815.1 | Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2540151, 389515, 3903434; Product type e : enzyme RNase III, ds RNA |
| [B] Psychromonas ingrahamii (strain 37) | PSYIN00614 | RNC_PSYIN | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: vfi:VF2087 ribonuclease III |
| [B] Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) | SHEAM00873 | RNC_SHEAM | Ribonuclease III KEGG: son:SO1348 ribonuclease III |
| [B] Shewanella baltica (strain OS155 / ATCC BAA-1091) | SHEB501141 | RNC_SHEB5 | Ribonuclease III |
| [B] Shewanella baltica (strain OS185) | SHEB801215 | RNC_SHEB8 | Ribonuclease III |
| [B] Shewanella baltica (strain OS195) | SHEB901264 | RNC_SHEB9 | PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: shw:Sputw3181_3005 ribonuclease III Ribonuclease III |
| [B] Shewanella baltica (strain OS223) | SHEB203015 | RNC_SHEB2 | Ribonuclease III |
| [B] Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) | SHEPC01132 | RNC_SHEPC | Ribonuclease III |
| [B] Shewanella sp. (strain W3-18-1) | SHESW02936 | RNC_SHESW | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: she:Shewmr4_2848 ribonuclease III |
| [B] Baumannia cicadellinicola (subsp. Homalodisca coagulata) | BAUCH00252 | Q1LTI3 | ribonuclease III identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 |
| [B] Dichelobacter nodosus (strain VCS1703A) | DICNV00656 | A5EV51 | Ribonuclease III |
| [B] Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) | NITOC02329 | RNC_NITOC | Ribonuclease III |
| [B] Alkalilimnicola ehrlichei (strain MLHE-1) | ALHEH01336 | RNC_ALHEH | Ribonuclease III |
| [B] Thioalkalivibrio sp. (strain HL-EbGR7) | THISH01067 | B8GPL1 | Ribonuclease III |
| [B] Buchnera aphidicola (subsp. Acyrthosiphon pisum) | BUCAI00240 | RNC_BUCAI | ribonuclease III |
| [B] Buchnera aphidicola (subsp. Baizongia pistaciae) | BUCBP00222 | RNC_BUCBP | COG0571; RNase III ribonuclease III |
| [B] Buchnera aphidicola (subsp. Schizaphis graminum) | BUCAP00237 | RNC_BUCAP | ribonuclease III |
| [B] Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) | BUCA500236 | RNC_BUCA5 | Ribonuclease III |
| [B] Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) | BUCAT00236 | RNC_BUCAT | Ribonuclease III |
| [B] Buchnera aphidicola subsp. Cinara cedri | BUCCC00149 | RNC_BUCCC | ribonuclease III COG_category K;COG_number COG0571; Rnc |
| [B] Enterobacter sp. (strain 638) | ENT3803026 | RNC_ENT38 | Ribonuclease III |
| [B] Erwinia tasmaniensis (strain DSM 17950 / ET1/99) | ERWT900991 | RNC_ERWT9 | Ribonuclease III |
| [B] Escherichia coli (strain 55989 / EAEC) | ECO5502764 | RNC_ECO55 | RNase III |
| [B] Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) | ECOLC01075 | RNC_ECOLC | Ribonuclease 3 |
| [B] Escherichia coli (strain DH10B) | ECODH02421 | RNC_ECODH | RNase III |
| [B] Escherichia coli (strain K12) | ECOLI02494 | RNC_ECOLI | Ribonuclease 3 |
| [B] Escherichia coli (strain SE11) | ECOSE02838 | RNC_ECOSE | Ribonuclease III |
| [B] Escherichia coli (strain SMS-3-5 / SECEC) | ECOSM02620 | RNC_ECOSM | Ribonuclease III |
| [B] Escherichia coli (strain UTI89 / UPEC) | ECOUT02831 | RNC_ECOUT | RNase III, ds RNA |
| [B] Escherichia coli O127:H6 (strain E2348/69 / EPEC) | ECO2702796 | RNC_ECO27 | RNase III |
| [B] Escherichia coli O139:H28 (strain E24377A / ETEC) | ECO2402693 | RNC_ECO24 | Ribonuclease III |
| [B] Escherichia coli O157:H7 | ECO5703226 | RNC_ECO57 | Residues 1 to 226 of 226 are 100.00 pct identical to residues 1 to 226 of 226 from Escherichia coli K-12 Strain MG1655: B2567 RNase III, ds RNA |
| [B] Escherichia coli O157:H7 (strain EC4115 / EHEC) | ECO5E03236 | RNC_ECO5E | Ribonuclease III |
| [B] Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) | ECOLU02818 | RNC_ECOLU | Ribonuclease 3 |
| [B] Escherichia coli O1:K1 / APEC | ECOK102486 | RNC_ECOK1 | RNase III |
| [B] Escherichia coli O45:K1 (strain S88 / ExPEC) | ECO4502606 | RNC_ECO45 | Ribonuclease 3 |
| [B] Escherichia coli O6 | ECOL602983 | RNC_ECOL6 | Ribonuclease 3 |
| [B] Escherichia coli O6:K15:H31 (strain 536) | ECOL502529 | RNC_ECOL5 | ribonuclease III |
| [B] Escherichia coli O7:K1 (strain IAI39 / ExPEC) | ECO7I02622 | RNC_ECO7I | Ribonuclease 3 |
| [B] Escherichia coli O81 (strain ED1a) | ECO8102836 | RNC_ECO81 | RNase III |
| [B] Escherichia coli O9:H4 (strain HS) | ECOHS02528 | RNC_ECOHS | Ribonuclease III |
| [B] Klebsiella pneumoniae (strain 342) | KLEP301203 | RNC_KLEP3 | Ribonuclease III |
| [B] Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) | KLEP702826 | RNC_KLEP7 | Ribonuclease III |
| [B] Erwinia carotovora (subsp. atroseptica) | ERWCT03249 | RNC_ERWCT | Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri ribonuclease III Rnc or b2567 or c3091 or z3848 or ecs3433 or sf2629 SWALL:RNC_ECOLI (SWALL:P05797) (226 aa) fasta scores: E(): 5.1e-83, 92.03% id in 226 aa ribonuclease III |
| [B] Photorhabdus luminescens (subsp. laumondii) | PHOLL03251 | RNC_PHOLL | ribonuclease III (RNase III) |
| [B] Proteus mirabilis (strain HI4320) | PROMH01867 | RNC_PROMH | RNase III, ds RNA |
| [B] Salmonella agona (strain SL483) | SALA402547 | B5F1G1 | Ribonuclease III |
| [B] Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 | SALCH02549 | Q57LD0 | IPR000999: Ribonuclease III family; IPR001159: Double-stranded RNA binding (DsRBD) domain RNase III, ds RNA |
| [B] Salmonella dublin (strain CT_02021853) | SALDC02685 | B5FRC5 | Ribonuclease III |
| [B] Salmonella enteritidis PT4 (strain P125109) | SALEP02541 | RNC_SALEP | Ribonuclease III |
| [B] Salmonella gallinarum (strain 287/91 / NCTC 13346) | SALG202511 | RNC_SALG2 | Ribonuclease III |
| [B] Salmonella heidelberg (strain SL476) | SALHS02656 | B4TE15 | Ribonuclease III |
| [B] Salmonella newport (strain SL254) | SALNS02606 | B4T1F8 | Ribonuclease III |
| [B] Salmonella paratyphi A (strain AKU_12601) | SALPK00275 | RNC_SALPK | Ribonuclease III |
| [B] Salmonella paratyphi-a | SALPA00265 | RNC_SALPA | similar to Salmonella typhi CT18 ribonuclease III ribonuclease III |
| [B] Salmonella schwarzengrund (strain CVM19633) | SALSV02623 | B4TS14 | Ribonuclease III |
| [B] Salmonella typhi | SALTI02582 | RNC_SALTI | Ribonuclease 3 |
| [B] Salmonella typhimurium | SALTY02482 | RNC_SALTY | ribonuclease III (SW:RNC_SALTY); degrades ds RNA RNase III |
| [B] Serratia proteamaculans (strain 568) | SERP503643 | RNC_SERP5 | Ribonuclease III |
| [B] Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) | SHIB302252 | RNC_SHIB3 | Ribonuclease III |
| [B] Shigella boydii serotype 4 (strain Sb227) | SHIBS02109 | RNC_SHIBS | ds RNA; Code: K; COG: COG0571 RNase III |
| [B] Shigella dysenteriae serotype 1 (strain Sd197) | SHIDS02174 | RNC_SHIDS | Code: K; COG: COG0571 RNase III, ds RNA |
| [B] Shigella flexneri | SHIFL02355 | RNC_SHIFL | Residues 1 to 226 of 226 are 100 pct identical to residues 1 to 226 of a 226 aa protein from Escherichia coli O157:H7 EDL933 ref: NP_289124.1 RNase III, ds RNA |
| [B] Shigella flexneri serotype 5b (strain 8401) | SHIF802234 | RNC_SHIF8 | RNase III, ds RNA Code: K; COG: COG0571 |
| [B] Shigella sonnei (strain Ss046) | SHISS02228 | RNC_SHISS | ds RNA; Code: K; COG: COG0571 RNase III |
| [B] Sodalis glossinidius (strain morsitans) | SODGM01754 | RNC_SODGM | ribonuclease III |
| [B] Wigglesworthia glossinidia brevipalpis | WIGBR00196 | RNC_WIGBR | Transcription |
| [B] Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) | YERE800960 | RNC_YERE8 | Ribonuclease III |
| [B] Yersinia pestis | YERPE02513 | RNC_YERPE | Ribonuclease 3 |
| [B] Yersinia pestis (biovar Antiqua strain Antiqua) | YERPA02318 | RNC_YERPA | Ribonuclease III |
| [B] Yersinia pestis (biovar Antiqua strain Nepal516) | YERPN01155 | RNC_YERPN | Ribonuclease III |
| [B] Yersinia pestis (strain Pestoides F) | YERPP01456 | RNC_YERPP | Ribonuclease III |
| [B] Yersinia pestis bv. Antiqua (strain Angola) | YERPG03104 | RNC_YERPG | Ribonuclease III |
| [B] Yersinia pseudotuberculosis | YERPS02869 | RNC_YERPS | Ribonuclease 3 |
| [B] Yersinia pseudotuberculosis (serotype O:1b / strain IP 31758) | YERP301103 | RNC_YERP3 | Ribonuclease III |
| [B] Yersinia pseudotuberculosis serotype IB (strain PB1/+) | YERPB02938 | B2KA47 | Ribonuclease III |
| [B] Yersinia pseudotuberculosis serotype O:3 (strain YPIII) | YERPY01164 | B1JRC7 | Ribonuclease III |
| [B] Candidatus Blochmannia floridanus | BLOFL00510 | RNC_BLOFL | COG caterory=K ribonuclease III |
| [B] Legionella pneumophila (strain Corby) | LEGPC01270 | RNC_LEGPC | Ribonuclease III |
| [B] Legionella pneumophila (strain Lens) | LEGPL01826 | RNC_LEGPL | Similar to ribonuclease III hypothetical protein |
| [B] Legionella pneumophila (strain Paris) | LEGPA01828 | RNC_LEGPA | Similar to ribonuclease III hypothetical protein |
| [B] Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152) | LEGPH01814 | RNC_LEGPH | conserved gene ribonuclease III |
| [B] Methylococcus capsulatus | METCA01365 | RNC_METCA | identified by similarity to SP:P05797; match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 ribonuclease III |
| [B] Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) | ALCBS01629 | RNC_ALCBS | Ribonuclease III |
| [B] Hahella chejuensis (strain KCTC 2396) | HAHCH01694 | RNC_HAHCH | ribonuclease III TIGRFAMsMatches:TIGR02191 |
| [B] Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) | CHRSD01619 | Q1QX24 | Ribonuclease III |
| [B] Marinomonas sp. (strain MWYL1) | MARMS01224 | RNC_MARMS | Ribonuclease III |
| [B] Actinobacillus pleuropneumoniae serotype 3 (strain JL03) | ACTPJ00502 | RNC_ACTPJ | Ribonuclease III |
| [B] Actinobacillus pleuropneumoniae serotype 5b (strain L20) | ACTP200536 | RNC_ACTP2 | Ribonuclease III |
| [B] Actinobacillus pleuropneumoniae serotype 7 (strain AP76) | ACTP700567 | B3GX85 | Ribonuclease III |
| [B] Actinobacillus succinogenes (strain ATCC 55618 / 130Z) | ACTSZ00571 | RNC_ACTSZ | Ribonuclease III |
| [B] Haemophilus ducreyi | HAEDU01340 | RNC_HAEDU | ribonuclease III |
| [B] Haemophilus influenzae | HAEIN00014 | RNC_HAEIN | Ribonuclease 3 |
| [B] Haemophilus influenzae (strain 86-028NP) | HAEI800014 | RNC_HAEI8 | RNase III; Similar to: HI0014, RNC_HAEIN ribonuclease III |
| [B] Haemophilus influenzae (strain PittEE) | HAEIE00569 | RNC_HAEIE | Ribonuclease III |
| [B] Haemophilus influenzae (strain PittGG) | HAEIG00415 | RNC_HAEIG | Ribonuclease III |
| [B] Haemophilus parasuis serovar 5 (strain SH0165) | HAEPS00120 | RNC_HAEPS | Ribonuclease III/dsRNA-specific ribonuclease |
| [B] Haemophilus somnus (strain 129PT) | HAES101243 | Q0I4Z3 | Ribonuclease III |
| [B] Haemophilus somnus (strain 2336) | HAES200814 | RNC_HAES2 | Ribonuclease 3 |
| [B] Mannheimia succiniciproducens (strain MBEL55E) | MANSM00368 | RNC_MANSM | dsRNA-specific ribonuclease Rnc protein |
| [B] Pasteurella multocida | PASMU00061 | RNC_PASMU | Ribonuclease 3 |
| [B] Acinetobacter baumannii (strain ACICU) | ACIBC02787 | B2HWP9 | DsRNA-specific ribonuclease |
| [B] Acinetobacter baumannii (strain AYE) | ACIBY00889 | RNC_ACIBY | Ribonuclease III, ds RNA |
| [B] Acinetobacter baumannii (strain SDF) | ACIBS00804 | RNC_ACIBS | Ribonuclease III, ds RNA |
| [B] Acinetobacter sp. (strain ADP1) | ACIAD02340 | RNC_ACIAD | Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme ribonuclease III, ds RNA |
| [B] Francisella tularensis (subsp. tularensis) | FRATT01502 | RNC_FRATT | Similar to Q9KPB2 Ribonuclease III from Vibrio cholerae (225 aa). FASTA: opt: 619 Z-score: 736.6 E(): 3.5e-33 Smith-Waterman score: 619; 45.089 identity in 224 aa overlap Ribonuclease III |
| [B] Francisella tularensis subsp. holarctica (strain FTA) | FRATF00440 | RNC_FRATF | Ribonuclease 3 |
| [B] Francisella tularensis subsp. holarctica (strain LVS) | FRATH00508 | RNC_FRATH | Ribonuclease III |
| [B] Francisella tularensis subsp. holarctica (strain OSU18) | FRATO00434 | RNC_FRATO | Ribonuclease III |
| [B] Francisella tularensis subsp. mediasiatica (strain FSC147) | FRATM00274 | RNC_FRATM | Ribonuclease III |
| [B] Francisella tularensis subsp. novicida (strain U112) | FRATN01420 | RNC_FRATN | ribonuclease III |
| [B] Francisella tularensis subsp. tularensis (strain WY96-3418) | FRATW00267 | RNC_FRATW | Ribonuclease III |
| [B] Mycobacteriophage FRAT1 | FRAT101484 | RNC_FRAT1 | Ribonuclease III Similar to Q9KPB2 Ribonuclease III from Vibrio cholerae (225 aa). FASTA: opt: 619 Z-score: 736.6 E(): 3.5e-33 Smith-Waterman score: 619; 45.089 identity in 224 aa overlap |
| [B] Thiomicrospira crunogena (strain XCL-2) | THICR00732 | Q31HP3 | Ribonuclease III |
| [B] Aliivibrio salmonicida (strain LFI1238) | ALISL02236 | B6EKM9 | Ribonuclease III |
| [B] Vibrio fischeri (strain MJ11) | VIBFM02113 | B5FAH0 | Ribonuclease III |
| [B] Photobacterium profundum | PHOPR02843 | RNC_PHOPR | putative ribonuclease III |
| [B] Vibrio cholerae | VIBCH02420 | RNC_VIBCH | similar to SP:P05797 GB:X02946 PID:42769 PID:499371 PID:987642; identified by sequence similarity; putative ribonuclease III |
| [B] Vibrio cholerae (strain ATCC 39541 / O395) | VIBC301911 | RNC_VIBC3 | Ribonuclease III |
| [B] Vibrio cholerae serotype O1 (strain M66-2) | VIBCM02333 | RNC_VIBCM | |
| [B] Vibrio fischeri (strain ATCC 700601 / ES114) | VIBF102083 | RNC_VIBF1 | ribonuclease III |
| [B] Vibrio harveyi (strain ATCC BAA-1116 / BB120) | VIBHB03127 | RNC_VIBHB | Putative uncharacterized protein |
| [B] Vibrio parahaemolyticus | VIBPA02567 | RNC_VIBPA | similar to GB:AAF95603.1 (AE004316) percent identity 88 in 225 aa ribonuclease III |
| [B] Vibrio splendidus (strain LGP32) | VIBSL02474 | RNC_VIBSL | Ribonuclease III |
| [B] Vibrio vulnificus | VIBVU01398 | RNC_VIBVU | COG0571 dsRNA-specific ribonuclease |
| [B] Vibrio vulnificus (strain YJ016) | VIBVY02802 | RNC_VIBVY | Ribonuclease 3 |
| [B] Stenotrophomonas maltophilia (strain K279a) | STRMK03324 | B2FPX9 | Putative ribonuclease III |
| [B] Stenotrophomonas maltophilia (strain R551-3) | STRM502956 | B4SRL0 | Ribonuclease III |
| [B] Xanthomonas axonopodis (pv. citri) | XANAC01288 | RNC_XANAC | identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark ribonuclease III |
| [B] Xanthomonas campestris pv. campestris | XANCP01240 | RNC_XANCP | Ribonuclease 3 |
| [B] Xanthomonas campestris pv. campestris (strain 8004) | XANC802875 | RNC_XANC8 | ribonuclease III |
| [B] Xanthomonas campestris pv. campestris (strain B100) | XANCB03011 | B0RX27 | Ribonuclease III |
| [B] Xanthomonas campestris pv. vesicatoria (strain 85-10) | XANC501343 | RNC_XANC5 | ribonuclease III |
| [B] Xanthomonas oryzae (pv. oryzae) | XANOR01674 | RNC_XANOR | identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark ribonuclease III |
| [B] Xanthomonas oryzae pv. oryzae (strain MAFF 311018) | XANOM01612 | Q2P4M1 | ribonuclease III identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker |
| [B] Xanthomonas oryzae pv. oryzae (strain PXO99A) | XANOP02655 | B2SRX7 | Ribonuclease III |
| [B] Xylella fastidiosa | XYLFA02200 | NP_299525.1 | similar to SP|P05797 (percent identity: 50 %/query alignment coverage: 98.1 %/subject alignment coverage: 92.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder/Start codon shift: -93 ribonuclease III |
| [B] Xylella fastidiosa (strain M12) | XYLFM01264 | RNC_XYLFM | Ribonuclease III |
| [B] Xylella fastidiosa (strain M23) | XYLF201293 | RNC_XYLF2 | Ribonuclease III |
| [B] Xylella fastidiosa (strain Temecula1 / ATCC 700964) | XYLFT01200 | RNC_XYLFT | Ribonuclease 3 |
| [B] Ruthia magnifica subsp. Calyptogena magnifica | RUTMC00559 | A1AWQ6 | Ribonuclease III |
| [B] Magnetococcus sp. (strain MC-1) | MAGSM00868 | RNC_MAGSM | Ribonuclease III PFAM: ribonuclease III; double-stranded RNA binding domain protein KEGG: mfa:Mfla_1007 ribonuclease III |
| [B] Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) | LEPBP02515 | B0SM35 | Ribonuclease III |
| [B] Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) | LEPBA02438 | B0SDK6 | Ribonuclease III |
| [B] Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) | LEPBJ01813 | RNC_LEPBJ | Ribonuclease III cytoplasmic protein |
| [B] Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) | LEPBL00786 | RNC_LEPBL | Ribonuclease III cytoplasmic protein |
| [B] Leptospira interrogans | LEPIN04406 | RNC_LEPIN | Ribonuclease 3 |
| [B] Leptospira interrogans (serogroup Icterohaemorrhagiae / serovar Copenhageni) | LEPIC03439 | RNC_LEPIC | identified by sequence similarity; putative; ORF located using Blastx/Glimmer dsRNase III |
| [B] Borrelia afzelii (strain PKo) | BORAP00711 | RNC_BORAP | Ribonuclease III |
| [B] Borrelia burgdorferi | BORBU00705 | RNC_BORBU | similar to PID:1237014 SP:P51833 PID:1389549 GB:AL009126 percent identity: 44.10; identified by sequence similarity; putative ribonuclease III (rnc) |
| [B] Borrelia burgdorferi (strain ZS7) | BORBZ00671 | B7J0F2 | Ribonuclease III |
| [B] Borrelia duttonii (strain Ly) | BORDL00675 | B5RMP9 | Ribonuclease III |
| [B] Borrelia garinii | BORGA00695 | RNC_BORGA | Ribonuclease 3 |
| [B] Borrelia hermsii (strain DAH) | BORHD00678 | B2S148 | Ribonuclease III |
| [B] Borrelia recurrentis (strain A1) | BORRA00663 | B5RQ45 | Ribonuclease III |
| [B] Borrelia turicatae (strain 91E135) | BORT900677 | A1R0D0 | Ribonuclease III |
| [B] Treponema denticola | TREDE01017 | RNC_TREDE | identified by similarity to SP:P51833; match to protein family HMM PF00035; match to protein family HMM PF00636 ribonuclease III |
| [B] Treponema pallidum | TREPA00804 | RNC_TREPA | similar to GB:AE000783 percent identity: 41.03; identified by sequence similarity; putative ribonuclease III (rnc) |
| [B] Treponema pallidum subsp. pallidum (strain SS14) | TREPS00798 | RNC_TREPS | Ribonuclease III |
| [B] Phytoplasma mali (strain AT) | PHYMT00019 | RNC_PHYMT | DsRNA-specific ribonuclease |
| [B] Phytoplasma australiense | PHYAS00574 | B1VAJ2 | DsRNA-specific ribonuclease |
| [B] Aster yellows witches'-broom phytoplasma (strain AYWB) | AYWBP00140 | RNC_AYWBP | dsRNA-specific ribonuclease |
| [B] Onion yellows phytoplasma | ONYPE00564 | RNC_ONYPE | PAM608 identified by sequence similarity; putative dsRNA-specific ribonuclease |
| [B] Petrotoga mobilis (strain DSM 10674 / SJ95) | PETMO01876 | A9BIG2 | Ribonuclease III |
| [B] Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) | THELT00058 | RNC_THELT | Ribonuclease III |
| [B] Thermotoga maritima | THEMA01086 | RNC_THEMA | Ribonuclease 3 |
| [B] Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) | THEP101616 | RNC_THEP1 | RNAse III |
| [B] Thermotoga sp. (strain RQ2) | THESQ01685 | RNC_THESQ | Ribonuclease III |
| [B] Methylokorus infernorum (strain V4) | METI401109 | B3DV16 | Ribonuclease III |
| [B] Elusimicrobium minutum (strain Pei191) | ELUMP00648 | B2KC89 | Ribonuclease III |
| [B] Uncultured termite group 1 bacterium phylotype Rs-D17 | UNCTG00591 | B1H0Q0 | Ribonuclease III |