List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 183977

dihydrodipicolinate synthase
This group has 7 members: 7 [B]acteria
Fingerprint: TGTRIEP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Phytoplasma sp. (strain STRAWB1)STRAW06339  UniProtKB/TrEMBL Q829R6  Putative dihydrodipicolinate synthase
[B] Streptomyces coelicolorSTRCO01894   NP_626178.1  SCI7.30, probable dihydrodipicolinate synthase, len: 317 aa; similar to many egs. TR:O86841 (EMBL:AL031260) putative dihydrodipicolinate synthase from Streptomyces coelicolor (299 aa) fasta scores; opt: 1018, z-score: 1116.9, E(): 0, (56.4% identity in 305 aa overlap) and SW:DAPA_BRELA dihydrodipicolinate synthase from Brevibacterium lactofermentum (301 aa) fasta scores; opt: 800, z-score: 879.6, E(): 0, (46.6% identity in 292 aa overlap). Contains Pfam match to entry PF00701 DHDPS, Dihydrodipicolinate synthetase family and Prosite matches to PS00665 Dihydrodipicolinate synthetase signature 1 and PS00666 Dihydrodipicolinate synthetase signature 2. putative dihydrodipicolinate synthase
[B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)STRGG05480  UniProtKB/TrEMBL B1W126  Putative dihydrodipicolinate synthase
[B] Leuconostoc citreum (strain KM20)LEUCK01141  UniProtKB/Swiss-Prot DAPA_LEUCK  Dihydrodipicolinate synthase
[B] Erythrobacter litoralis (strain HTCC2594)ERYLH01544  UniProtKB/Swiss-Prot DAPA_ERYLH  dihydrodipicolinate synthase COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase
[B] Novosphingobium aromaticivorans (strain DSM 12444)NOVAD01434  UniProtKB/Swiss-Prot DAPA_NOVAD  Dihydrodipicolinate synthase
[B] Desulfococcus oleovorans (strain DSM 6200 / Hxd3)DESOH02650  UniProtKB/TrEMBL A8ZX91  Dihydrodipicolinate synthase