List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 206964

beta-galactosidase
This group has 9 members: 9 [B]acteria
Fingerprint: AKRPGMH

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacillus haloduransBACHD01986  UniProtKB/TrEMBL Q9KBA6  beta-galactosidase
[B] Bacillus licheniformis (strain DSM 13 / ATCC 14580)BACLD04043  UniProtKB/TrEMBL Q65CX4  InterProMatches:IPR002048; Molecular Function: calcium ion binding (GO:0004565@[IEA]; GO:0005975@[IEA]; GO:0008270@[IEA]; GO:0005509@[NR]) Glycoside Hydrolase Family 42
[B] Bacillus subtilisBACSU03411   CAB15418.1  Hypothetical protein yvfN
[B] Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)EXIS201615  UniProtKB/TrEMBL B1YH49  Beta-galactosidase
[B] Lactobacillus acidophilusLACAC01279  UniProtKB/TrEMBL Q5FJD5  beta-galactosidase
[B] Lactobacillus fermentum (strain IFO 3956 / LMG 18251)LACF300767  UniProtKB/TrEMBL B2GBT4  Beta-galactosidase
[B] Lactobacillus johnsoniiLACJO00574  UniProtKB/TrEMBL Q74KL4  contains beta-galactosidase domain hypothetical protein
[B] Lactobacillus plantarumLACPL02841  UniProtKB/TrEMBL Q88SG0  beta-galactosidase I
[B] Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523)LEUMM00991  UniProtKB/TrEMBL Q03XA8  Beta-galactosidase