List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 25030
SMALL SUBUNIT
This group has 7 members: 7 [B]acteria
Fingerprint: AKERVIS
| [B] Methylobacterium nodulans (strain ORS2060 / LMG 21967) | METNO01706 | CYSD_METNO | Sulfate adenylyltransferase, small subunit |
| [B] Rhizobium meliloti | RHIME05310 | NODP_RHIME | trimmed 25 residues from glimmer prediction to give better Shine-Dalgarno and initiating Met; makes activated sulfate for transfer to Nod Factor via NodH; similarity to PAPS reductase family, CysD subfamily NodP1 ATP-SULFURYLASE SMALL SUBUNIT |
| [B] Sinorhizobium medicae (strain WSM419) | SINMW04474 | A6UI79 | Sulfate adenylyltransferase, small subunit |
| [B] Hyphomonas neptunium (strain ATCC 15444) | HYPNA00770 | CYSD_HYPNA | Sulfate adenylyltransferase, small subunit |
| [B] Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) | SPHWW03299 | A5VBM1 | Sulfate adenylyltransferase subunit 2 |
| [B] Alkalilimnicola ehrlichei (strain MLHE-1) | ALHEH02322 | CYSD2_ALHEH | Sulfate adenylyltransferase, small subunit |
| [B] Vibrio harveyi (strain ATCC BAA-1116 / BB120) | VIBHB00644 | CYSD_VIBHB | Putative uncharacterized protein |