List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 205727

Acetyl-CoA C-acyltransferase FadA
This group has 5 members: 5 [B]acteria
Fingerprint: AFGARSH

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Alteromonas macleodii (strain DSM 17117 / Deep ecotype)ALTMD03685  UniProtKB/TrEMBL B4RZI1  Fatty oxidation complex, beta subunit
[B] Colwellia psychrerythraea (strain 34H / ATCC BAA-681)COLP300351  UniProtKB/Swiss-Prot FADA_COLP3  identified by similarity to SP:P21151; match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; match to protein family HMM TIGR02445 fatty oxidation complex, beta subunit
[B] Pseudoalteromonas atlantica (strain T6c / BAA-1087)PSEA600201  UniProtKB/Swiss-Prot FADA_PSEA6  Acetyl-CoA C-acyltransferase FadA
[B] Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)SHEDO00014  UniProtKB/Swiss-Prot FADA_SHEDO  Acetyl-CoA C-acyltransferase FadA
[B] Shewanella frigidimarina (strain NCIMB 400)SHEFN00012  UniProtKB/Swiss-Prot FADA_SHEFN  Acetyl-CoA C-acyltransferase FadA