List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 350397

hydrolase
This group has 13 members: 13 [B]acteria
Fingerprint: ADNELAW

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Streptomyces coelicolorSTRCO03463  UniProtKB/TrEMBL Q9RKF0  SCE65.23, possible hydrolase, len: 798 aa; similar to SW:AGAB_VIBS7 (EMBL:D21202) Vibrio sp. (strain JT0107) beta-agarase B (EC 3.2.1.81) AgaB, 955 aa; fasta socres: opt: 1394 z-score: 1581.4 E(): 0; 39.0% identity in 772 aa overlap. Contains possible hydrophobic membrane spanning region and Leucine TTA codon, possible target for bldA regulation putative hydrolase
[B] Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)SACD202629  UniProtKB/TrEMBL Q21HC5  GTPase EngC
[B] Pseudoalteromonas atlantica (strain T6c / BAA-1087)PSEA601949  UniProtKB/TrEMBL Q15UE9  Agarase precursor
[B] Pseudomonas aeruginosaPSEAE01047  UniProtKB/TrEMBL Q9I4S8  Putative uncharacterized protein
[B] Pseudomonas aeruginosa (strain LESB58)PSEA804251  UniProtKB/TrEMBL B7UXE5  Putative uncharacterized protein
[B] Pseudomonas aeruginosa (strain UCBPP-PA14)PSEAB04063  UniProtKB/TrEMBL Q02IL2  hypothetical protein
[B] Pseudomonas entomophila (strain L48)PSEE401165  UniProtKB/TrEMBL Q1IDU2  putative hydrolase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme
[B] Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)PSEF501257  UniProtKB/TrEMBL Q4KH74  hydrolase, putative
[B] Pseudomonas fluorescens (strain PfO-1)PSEPF01221  UniProtKB/TrEMBL Q3KGY7  hydrolase, putative
[B] Pseudomonas putida (strain F1 / ATCC 700007)PSEP101144  UniProtKB/TrEMBL A5VZL3  Beta-agarase precursor
[B] Pseudomonas putida (strain GB-1)PSEPG04250  UniProtKB/TrEMBL B0KUB2  Beta-agarase unknown EC_number=3.2.1.81 KEGG: pen:PSEEN1274 hydrolase
[B] Pseudomonas putida (strain KT2440)PSEPK01113  UniProtKB/TrEMBL Q88NS8  similar to GB:X00734, SP:P04350, SP:P05217, SP:P07437, PID:35959, PID:496887, and PID:897763; identified by sequence similarity; putative hydrolase, putative
[B] Pseudomonas putida (strain W619)PSEPW01145  UniProtKB/TrEMBL B1J1C1  Beta-agarase precursor