List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 212349

hydrolase
This group has 6 members: 6 [B]acteria
Fingerprint: FGWMNDP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Agrobacterium tumefaciens (strain C58 / ATCC 33970)AGRT500925  UniProtKB/TrEMBL A9CJP5  Sucrose hydrolase
[B] Rhizobium etli (strain CFN 42 / ATCC 51251)RHIEC04083  UniProtKB/TrEMBL Q2JZP2  beta-fructofuranosidase protein Similar to AGR_C_1721p [Agrobacterium tumefaciens], FruA [Bacillus megaterium] Similar to swissprot:Q8UGU1 Putative location:bacterial cytoplasm Psort-Score: 0.1210; go_function: hydrolase activity, hydrolyzing O-glycosyl compounds [goid 0004553]; go_function: hydrolase activity [goid 0016787]; go_process: carbohydrate metabolism [goid 0005975]
[B] Rhizobium etli (strain CIAT 652)RHIE604393  UniProtKB/TrEMBL B3Q4I9  Beta-fructofuranosidase protein
[B] Rhizobium leguminosarum bv. viciae (strain 3841)RHIL305277  UniProtKB/TrEMBL Q1M3Q6  putative glycosyl hydrolase similarity:fasta; SWALL:INVA_ZYMMO (SWALL:P35636); Zymomonas mobilis; sucrose-6-phosphate hydrolase e1; invA; length 512 aa; id=30.89; ungapped id=35.1; E()=1.1e-27; 492 aa overlap; query 110-564 aa; subject 22-491 aa similarity:fasta; SWALL:Q8UGU1 (EMBL:AE009059); Agrobacterium tumefaciens; sucrose hydrolase; cscA; length 543 aa; id=55.41; ungapped id=56.34; E()=4.3e-120; 545 aa overlap; query 29-567 aa; subject 1-542 aa possible alternative start site at codon 29
[B] Novosphingobium aromaticivorans (strain DSM 12444)NOVAD01867  UniProtKB/TrEMBL Q2G749  Glycoside hydrolase, family 32
[B] Mesoplasma florumMESFL00528  UniProtKB/TrEMBL Q6F0T9  sucrose-6-phosphate hydrolase