List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 238087

transaldolase
This group has 12 members: 12 [B]acteria
Fingerprint: PNITVKI

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511)FLAPJ01021  UniProtKB/Swiss-Prot TAL_FLAPJ  Transaldolase
[B] Gramella forsetii (strain KT0803)GRAFK00687  UniProtKB/TrEMBL A0LZ84  transaldolase
[B] Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)DEIDV01273  UniProtKB/TrEMBL C1CV54  Putative transaldolase
[B] Deinococcus geothermalis (strain DSM 11300)DEIGD01086  UniProtKB/TrEMBL Q1IZD4  transaldolase, putative KEGG: dra:DR1337 transaldolase, ev=1e-108, 83% identity TIGRFAM: transaldolase, putative: (2.6e-108) PFAM: Transaldolase: (1.2e-50)
[B] Bacillus amyloliquefaciens (strain FZB42)BACA203307  UniProtKB/Swiss-Prot TAL_BACA2  Tal
[B] Bacillus licheniformis (strain DSM 13 / ATCC 14580)BACLD03731  UniProtKB/TrEMBL Q65DU1  transaldolase-like protein; Biological Process: carbohydrate metabolism (GO:0005737@[IEA]; GO:0006098@[IEA]; GO:0016740@[IEA]) Transaldolase C
[B] Bacillus pumilus (strain SAFR-032)BACP203301  UniProtKB/Swiss-Prot TAL_BACP2  Transaldolase
[B] Bacillus subtilisBACSU03709   CAB15728.2  Transaldolase
[B] Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)EXIS202680  UniProtKB/Swiss-Prot TAL_EXIS2  Transaldolase
[B] Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)EXISA01340  UniProtKB/Swiss-Prot TAL_EXISA  Probable transaldolase
[B] Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)CLOB804546  UniProtKB/TrEMBL A6LW16  Putative transaldolase
[B] Symbiobacterium thermophilumSYMTH00064  UniProtKB/Swiss-Prot TAL_SYMTH  Probable transaldolase