List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
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The close groups are made of the set of all
groups that are linked by at least one pair
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Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
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proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
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OMA fingerprint
The fingerprint is a subsequence that is specific to a
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OMA

Keyword Protein Sequence Group Entry

OMA Group 281960

Putative cyclase
This group has 49 members: 1 [A]rchaea 48 [B]acteria
Fingerprint: CPVNVGR

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Methanoregula boonei (strain 6A8)METB600255  UniProtKB/TrEMBL A7I4W8  Cyclase family protein
[B] Rhodococcus erythropolis (strain PR4 / NBRC 100887)RHOE405455  UniProtKB/TrEMBL C0ZSI1  Putative uncharacterized protein
[B] Salinibacter ruber (strain DSM 13855)SALRD01456  UniProtKB/Swiss-Prot KYNB_SALRD  Putative cyclase superfamily identified by match to protein family HMM PF04199
[B] Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)DEIDV01718  UniProtKB/TrEMBL C1CWE9  Putative cyclase; putative Predicted metal- dependent hydrolase
[B] Deinococcus geothermalis (strain DSM 11300)DEIGD01512  UniProtKB/Swiss-Prot KYNB_DEIGD  putative cyclase PFAM: putative cyclase: (5.6e-42) KEGG: pae:PA2081 hypothetical protein, ev=1e-42, 46% identity
[B] Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)EXIS200177  UniProtKB/TrEMBL B1YHD3  Arylformamidase
[B] Maricaulis maris (strain MCS10)MARMM01466  UniProtKB/Swiss-Prot KYNB_MARMM  Cyclase family protein
[B] Sphingopyxis alaskensisSPHAL01369  UniProtKB/Swiss-Prot KYNB_SPHAL  putative cyclase
[B] Bordetella avium (strain 197N)BORA102390  UniProtKB/Swiss-Prot KYNB_BORA1  putative cyclase
[B] Bordetella bronchisepticaBORBR03243  UniProtKB/Swiss-Prot KYNB_BORBR  ortholog of Bordetella pertussis (BX470248) BP1234 conserved hypothetical protein
[B] Bordetella parapertussisBORPA01835   BORPA_A.1848  ortholog of Bordetella pertussis (BX470248) BP1234 pseudo conserved hypothetical protein (pseudogene)
[B] Bordetella pertussisBORPE01122  UniProtKB/Swiss-Prot KYNB_BORPE  Similar to Pseudomonas aeruginosa hypothetical protein Pa2081 TR:Q9I234 (EMBL:AE004635) (213 aa) fasta scores: E(): 3.2e-46, 58.25% id in 206 aa, and to Synechocystis sp hypothetical 23.8 kDa protein Slr2121 TR:P73988 (EMBL:D90911) (215 aa) fasta scores: E(): 9.2e-14, 31.62% id in 215 aa conserved hypothetical protein
[B] Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)BORPD03084  UniProtKB/Swiss-Prot KYNB_BORPD  Putative uncharacterized protein
[B] Burkholderia ambifaria (strain MC40-6)BURA402465  UniProtKB/Swiss-Prot KYNB_BURA4  Arylformamidase
[B] Burkholderia cenocepacia (strain AU 1054)BURCA01945  UniProtKB/Swiss-Prot KYNB_BURCA  Putative cyclase
[B] Burkholderia cenocepacia (strain HI2424)BURCH02562  UniProtKB/Swiss-Prot KYNB_BURCH  cyclase family protein PFAM: cyclase family protein KEGG: bcn:Bcen_1966 putative cyclase
[B] Burkholderia cenocepacia (strain MC0-3)BURCC02575  UniProtKB/Swiss-Prot KYNB_BURCC  Arylformamidase
[B] Burkholderia cepacia (strain ATCC 53795 / AMMD)BURCM02612  UniProtKB/Swiss-Prot KYNB_BURCM  cyclase family protein PFAM: cyclase family protein KEGG: bur:Bcep18194_A5908 putative cyclase
[B] Burkholderia cepacia (strain J2315 / LMG 16656)BURCJ02670  UniProtKB/Swiss-Prot KYNB_BURCJ  putative cyclase
[B] Burkholderia multivorans (strain ATCC 17616 / 249)BURM102690  UniProtKB/Swiss-Prot KYNB_BURM1  Arylformamidase
[B] Burkholderia sp. (strain 383)BURS302715  UniProtKB/Swiss-Prot KYNB_BURS3  putative cyclase
[B] Burkholderia vietnamiensis (strain G4 / LMG 22486)BURVG02596  UniProtKB/Swiss-Prot KYNB_BURVG  Cyclase family protein
[B] Burkholderia malleiBURMA00295  UniProtKB/Swiss-Prot KYNB_BURMA  Cyclase, putative
[B] Burkholderia mallei (strain NCTC 10229)BURM902337  UniProtKB/Swiss-Prot KYNB_BURM9  Arylformamidase
[B] Burkholderia mallei (strain NCTC 10247)BURM700089  UniProtKB/Swiss-Prot KYNB_BURM7  Arylformamidase
[B] Burkholderia mallei (strain SAVP1)BURMS00608  UniProtKB/Swiss-Prot KYNB_BURMS  Arylformamidase
[B] Burkholderia phymatum (strain DSM 17167 / STM815)BURP800503  UniProtKB/Swiss-Prot KYNB_BURP8  Arylformamidase
[B] Burkholderia phytofirmans (strain DSM 17436 / PsJN)BURPP03143  UniProtKB/Swiss-Prot KYNB_BURPP  Arylformamidase
[B] Burkholderia pseudomalleiBURPS00850  UniProtKB/Swiss-Prot KYNB_BURPS  Similar to Ralstonia solanacearum hypothetical protein rsc0760 or rs05093 SWALL:Q8Y1D0 (EMBL:AL646060) (209 aa) fasta scores: E(): 5.8e-59, 74.87% id in 207 aa, and to Pseudomonas aeruginosa hypothetical protein pa2081 SWALL:Q9I234 (EMBL:AE004635) (213 aa) fasta scores: E(): 5.4e-52, 67.15% id in 207 aa, and to Synechocystis sp. hypothetical protein slr2121 SWALL:P73988 (EMBL:D90911) (215 aa) fasta scores: E(): 4.9e-14, 29.32% id in 208 aa conserved hypothetical protein
[B] Burkholderia pseudomallei (strain 1106a)BURP000888   ABN90793.1  Arylformamidase
[B] Burkholderia pseudomallei (strain 1710b)BURP101033   ABA49041.1  cyclase, putative identified by match to protein family HMM PF04199
[B] Burkholderia pseudomallei (strain 668)BURP600889  UniProtKB/Swiss-Prot KYNB_BURP6  Arylformamidase
[B] Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)BURTA00701   ABC37937.1  cyclase, putative identified by match to protein family HMM PF04199
[B] Burkholderia xenovorans (strain LB400)BURXL03572  UniProtKB/Swiss-Prot KYNB_BURXL  Kynureninase
[B] Cupriavidus taiwanensis (strain R1 / LMG 19424)CUPTR02245  UniProtKB/Swiss-Prot KYNB_CUPTR  Putative metal-dependent hydrolase, cyclase
[B] Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)RALEH02736  UniProtKB/Swiss-Prot KYNB_RALEH  predicted metal-dependent hydrolase/Putative cyclase
[B] Ralstonia eutropha (strain JMP134)RALEJ00803  UniProtKB/Swiss-Prot KYNB_RALEJ  Putative cyclase
[B] Ralstonia pickettii (strain 12J)RALPJ00690  UniProtKB/Swiss-Prot KYNB_RALPJ  Arylformamidase
[B] Ralstonia solanacearumRALSO00756  UniProtKB/Swiss-Prot KYNB_RALSO  Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN
[B] Acidovorax avenae subsp. citrulli (strain AAC00-1)ACIAC01096  UniProtKB/Swiss-Prot KYNB_ACIAC  cyclase family protein PFAM: cyclase family protein KEGG: pol:Bpro_3588 putative cyclase
[B] Delftia acidovorans (strain DSM 14801 / SPH-1)DELAS02141  UniProtKB/Swiss-Prot KYNB_DELAS  Arylformamidase
[B] Diaphorobacter sp. (strain TPSY)DIAST02368  UniProtKB/TrEMBL B9MCU2  Arylformamidase
[B] Polaromonas naphthalenivorans (strain CJ2)POLNA02950  UniProtKB/Swiss-Prot KYNB_POLNA  Cyclase family protein
[B] Polaromonas sp. (strain JS666 / ATCC BAA-500)POLSJ03515  UniProtKB/Swiss-Prot KYNB_POLSJ  putative cyclase
[B] Pseudomonas aeruginosaPSEAE02078  UniProtKB/Swiss-Prot KYNB_PSEAE  Kynurenine formamidase
[B] Pseudomonas aeruginosa (strain LESB58)PSEA803214  UniProtKB/TrEMBL B7VA22  Kynurenine formamidase, KynB
[B] Pseudomonas aeruginosa (strain PA7)PSEA703136  UniProtKB/Swiss-Prot KYNB_PSEA7  Arylformamidase
[B] Pseudomonas aeruginosa (strain UCBPP-PA14)PSEAB02999  UniProtKB/Swiss-Prot KYNB_PSEAB  kynurenine formamidase, KynB
[B] Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)PSEF500737   AAY96154.1  identified by match to protein family HMM PF04199 cyclase, putative