List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 78104

diguanylate phosphodiesterase
This group has 6 members: 6 [B]acteria
Fingerprint: VRMERLM

Protein List | Alignment | Close Groups | Phyletic Profile Download: download fasta, download darwin

[B] Acidothermus cellulolyticus (strain ATCC 43068 / 11B)ACIC100526  UniProtKB/TrEMBL A0LS92  diguanylate phosphodiesterase PFAM: EAL domain protein KEGG: fra:Francci3_3633 diguanylate phosphodiesterase (EAL domain)
[B] Frankia alni (strain ACN14a)FRAAA05707  UniProtKB/TrEMBL Q0RDJ3  hypothetical protein; putative signal peptide Evidence 5 : No homology to any previously reported sequences
[B] Frankia sp. (strain CcI3)FRASC03523  UniProtKB/TrEMBL Q2J6V7  diguanylate phosphodiesterase (EAL domain)
[B] Frankia sp. (strain EAN1pec)FRASN01076  UniProtKB/TrEMBL A8L553  Diguanylate phosphodiesterase
[B] Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)KINRD01797  UniProtKB/TrEMBL A6W900  Diguanylate phosphodiesterase
[B] Myxococcus xanthus (strain DK 1622)MYXXD02418  UniProtKB/TrEMBL Q1D9C4  EAL domain protein identified by match to protein family HMM PF00563