List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 53721

methyl-accepting chemotaxis sensory transducer
This group has 5 members: 5 [B]acteria
Fingerprint: GEIGAVM

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Acidothermus cellulolyticus (strain ATCC 43068 / 11B)ACIC100126  UniProtKB/TrEMBL A0LR42  methyl-accepting chemotaxis sensory transducer PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer KEGG: nwi:Nwi_2996 methyl-accepting chemotaxis protein
[B] Rhodopseudomonas palustrisRHOPA04462  UniProtKB/TrEMBL Q6N1C5  observed by proteomics Citation: Proteomics from VerBerkmoes et al. (2003) unpublished methyl-accepting chemotaxis sensory transducer
[B] Rhodopseudomonas palustris (strain HaA2)RHOP201069  UniProtKB/TrEMBL Q2J178  methyl-accepting chemotaxis sensory transducer
[B] Rhodopseudomonas palustris (strain TIE-1)RHOPT04896  UniProtKB/TrEMBL B3Q942  Methyl-accepting chemotaxis sensory transducer
[B] Sphingopyxis alaskensisSPHAL00230  UniProtKB/TrEMBL Q1GWL4  methyl-accepting chemotaxis sensory transducer