List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 212341

hydrolase
This group has 5 members: 1 [E]ukaryota 4 [B]acteria
Fingerprint: MNDPQRP

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Phaeosphaeria nodorumPHANO03133  UniProtKB/TrEMBL Q0V5V4  hypothetical protein
[B] Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)CLAM300626  UniProtKB/TrEMBL A5CNK1  Putative levanase/invertase
[B] Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667)CLAMS02709  UniProtKB/TrEMBL B0RBJ9  Putative sugar hydrolase
[B] Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360)ARTCA00725  UniProtKB/TrEMBL B8HC20  Levanase
[B] Arthrobacter sp. (strain FB24)ARTS203765  UniProtKB/TrEMBL A0K1K1  Levanase KEGG: bsu:BG12430 similar to levanase PFAM: Glycosyl hydrolase family 32, N terminal domain protein; Glycosyl hydrolase family 32, C-terminal domain protein SMART: glycoside hydrolase, family 32